PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY47244.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 26359.1 Da PI: 7.5439 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 4e-18 | 87 | 135 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g TEY47244.1 87 YRGVRKRN-WGKWVCEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 135 9****887.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEHKNFFENI VEHQLFTTTT TTTTTSAASA STSSSCSNES LSERDKGSSS NETTKSSQGE 60 KSGSEVSKRR RGGVAASAAA GEKHRAYRGV RKRNWGKWVC EIREPRKKSR IWLGTYPTAE 120 MAARAHDVAA LAIKGQAAYL NFPHLAQFLP RPASTAPKDI QAAAAKAAAA TFPAEAEPRL 180 VSSYSSTDLA AESMQESAST AHDDDTFFDL PDLSLSTASG RGGGYCYYVS SWPMAGEDPI 240 LWECS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 8e-46 | ERF family protein |