PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY47221.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 305aa MW: 34029.9 Da PI: 8.0284

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY47221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	5	27	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C +sF + L H+r+H TEY47221.1 5 HRCKLCYRSFANGRALGGHMRSH 27 79********************9 PP
2	zf-C2H2	11.1	0.0013	179	201	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F++ L H +H TEY47221.1 179 YRCEECNKLFRSYQALGGHRASH 201 9***********99999998887 PP
3	zf-C2H2	12.5	0.00044	224	246	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C++ Fs+ L H r+H TEY47221.1 224 HQCPFCDRIFSSGQALGGHKRSH 246 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MDKKHRCKLC YRSFANGRAL GGHMRSHMMK FYAEGKDLEQ ESGEIEHDFQ SSSSPSSSSS 60 DEESEEGLMS SYVLRDKRKN AAIAADRRDF VAQDGESETE SLKIWRRSKR VRESRASDFE 120 QSSPLSSISD TTPEEHVAHC LMMLSRDTWR QKIGRGYEGD EEEEESKKMA MKSKIRGRYR 180 CEECNKLFRS YQALGGHRAS HKKIKSAATA PPPPPEKSGG VKIHQCPFCD RIFSSGQALG 240 GHKRSHFIGA AAISTNRNST EKNSSRISQV LSIDLNLPAP ADDDEGSQIA ISAVSDAEFV 300 CNVKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	3e-52	C2H2 family protein