PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY47080.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 488aa    MW: 54952.2 Da    PI: 4.5409
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY47080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS112.26.9e-351314833371
        GRAS   3 elLlecAeavss.gdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +l+ ++ ea+++ ++ +laq +++ ++e ++p+g+ ++R+a  + e      +r            ++   + ++ ++a+++++++    +f+h +aN 
  TEY47080.1 131 HLIKAFGEAMHDgNNGSLAQVIIESINEKSNPEGTLVERVAYNMFESKYDEYLR------------QE---SIKNFATAFNVLYQTLISGRFAHNAANA 214
                 55666667777724557*************************999876655555............33...3778899999****************** PP

        GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                 aIle++  + e++H++Dfdi++G+QWpaL++aL+  +++   +R+T+++++ ++     s  e eet++ L + A+++g++++++    k ++d++ e+
  TEY47080.1 215 AILESIPVDaETLHVVDFDIGEGIQWPALIEALSRCRKP---VRLTAIKHEGKDgmsspSCWEFEETKKLLINHARHFGIELQIEE---KCIQDFKDEM 307
                 ******9887999********************976566...9*******9988999888899*********************98...7888887666 PP

        GRAS 194 Lrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk...vvvvveqe..adh.nsesFlerflealeyysalfdsleaklpreseeri 283
                    k    ++ l+ n++ +l ++ ++s+       e+Lk+  +l +k   +++v + e  +++ n+ sF     + +e+y al+++le klp   e r+
  TEY47080.1 308 KGRKDggvRDWLVFNCMAALPHMGRRSG-----VVEFLKAAEELLAKfdgILTVGDGEagVKLgNQVSFECYYGKLVEHYEALLEALECKLPYLGEGRA 401
                 666668889**************84433.....4458*****999987779***9999445568999******************************** PP

        GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvS 371
                  +E  +l++  +      + + ++r  +         e+G++  + s +   +a+ ++ + +s+ y+v     +++++vl Wk+  Lv vS
  TEY47080.1 402 AMECLFLAPFMCPFAWFDEWKEKARGLE--------FECGLEGRRASGESLGEARVMVGERESW-YSVRiegLRENEMVLRWKETVLVRVS 483
                 *********9998888877773333332........479***********************66.7776335569*************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
MMQSELFFPT FPTSHDDQDM IIDGVFFSPP FASSQDSPMV SSDSFFLDTF PNDLFGHGES  60
LVKISRSDID DICDWIHSSH SEDGTSLSAD GWSPAPSLES SQNTQILSAP EVPLNMPMED  120
TKLENELRLT HLIKAFGEAM HDGNNGSLAQ VIIESINEKS NPEGTLVERV AYNMFESKYD  180
EYLRQESIKN FATAFNVLYQ TLISGRFAHN AANAAILESI PVDAETLHVV DFDIGEGIQW  240
PALIEALSRC RKPVRLTAIK HEGKDGMSSP SCWEFEETKK LLINHARHFG IELQIEEKCI  300
QDFKDEMKGR KDGGVRDWLV FNCMAALPHM GRRSGVVEFL KAAEELLAKF DGILTVGDGE  360
AGVKLGNQVS FECYYGKLVE HYEALLEALE CKLPYLGEGR AAMECLFLAP FMCPFAWFDE  420
WKEKARGLEF ECGLEGRRAS GESLGEARVM VGERESWYSV RIEGLRENEM VLRWKETVLV  480
RVSTFCRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.13e-20GRAS family protein