PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46730.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 432aa MW: 47485.1 Da PI: 8.5252

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.5	2.3e-23	217	260	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rC+RtDGKkWRCsr+v + +k+CErH h++r rsrk++e TEY46730.1 217 DPEPWRCKRTDGKKWRCSRDVAPEQKYCERHAHKNRPRSRKHVE 260 79****************************************97 PP
2	QLQ	39.5	1.7e-14	159	190	2	33
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 FT aQlq+L++Q ++ Ky++a+ PvPp+Ll+ TEY46730.1 159 LFTSAQLQELERQKMIHKYIMASIPVPPQLLL 190 6*****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MGGMCNVTGA DVGIIGWKMP KPQHKFPNGG TLITQIINIS PPPHISYHTN TCPLPSFSLT 60 SSSHFYRFFS LLMRNGDDRK SLSSSSPLDC EVGLGLKMQL PPYSCDSGGV GVGQFLNGSS 120 NPPHFYDLSN GALLQRSLDN AAASRAYGGG MMPVCGKALF TSAQLQELER QKMIHKYIMA 180 SIPVPPQLLL STSTPTPSQC NTSSGGVELR YSTNGSDPEP WRCKRTDGKK WRCSRDVAPE 240 QKYCERHAHK NRPRSRKHVE ISPHKPSALP SPRSTSQFPY DQSRCIEWLM RGGNSDPSKQ 300 QWEYNKNDNN NNNNNASVYH PQFSDESATA QTRLFIDAIS SNKEEAEKKQ WQPSLSLSMC 360 DEKGDLGIGM MVKNQWVNPV SWMNSGGPLG EALCLGNAST TSNLTYPRSY GYSNSNTNSS 420 SEDGSHALNF IG

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MGGMCNVTGA DVGIIGWKMP KPQHKFPNGG TLITQIINIS PPPHISYHTN TCPLPSFSLT  60
SSSHFYRFFS LLMRNGDDRK SLSSSSPLDC EVGLGLKMQL PPYSCDSGGV GVGQFLNGSS  120
NPPHFYDLSN GALLQRSLDN AAASRAYGGG MMPVCGKALF TSAQLQELER QKMIHKYIMA  180
SIPVPPQLLL STSTPTPSQC NTSSGGVELR YSTNGSDPEP WRCKRTDGKK WRCSRDVAPE  240
QKYCERHAHK NRPRSRKHVE ISPHKPSALP SPRSTSQFPY DQSRCIEWLM RGGNSDPSKQ  300
QWEYNKNDNN NNNNNASVYH PQFSDESATA QTRLFIDAIS SNKEEAEKKQ WQPSLSLSMC  360
DEKGDLGIGM MVKNQWVNPV SWMNSGGPLG EALCLGNAST TSNLTYPRSY GYSNSNTNSS  420
SEDGSHALNF IG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	3e-37	GRF family protein