PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY46696.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 845aa    MW: 93973.3 Da    PI: 6.2265
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY46696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.79e-23148249199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+
  TEY46696.1 148 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGQEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELR 243
                 99*****************************7333.34459************************************************..44999999 PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                  +v+r+
  TEY46696.1 244 AGVRRA 249
                 999985 PP
2Auxin_resp121.94.7e-40274356183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha++t+++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg +d+dp rW++SkWr+Lk
  TEY46696.1 274 AWHAIQTNTMFTVYYKPRTSPAEFIVPYNQYMESIKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGSEDADPNRWKDSKWRCLK 356
                 89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 845 aa     Download sequence    
MDSPEVLIKG CNDVGGADPA PGNMNSDAGR AVDAERALYT ELWKACAGPL VTVPRENELV  60
FYFPQGHIEQ VEASTNQSSD QQMPVYNLPP KILCRVVNVL LKAEADTDEV FAQITLMPEA  120
NASLSQDENA ERKEPPPSSP PHLRVYSFCK TLTASDTSTH GGFSVLRRHA DECLPPLDMS  180
RQPPTQELVA KDLHGQEWRF RHIFRGQPRR HLLQSGWSVF VSSKRLVAGD AFIFLRGENG  240
ELRAGVRRAM RQQGNVPSSV ISSHSMHLGV LATAWHAIQT NTMFTVYYKP RTSPAEFIVP  300
YNQYMESIKQ NYSIGMRFKM RFEGEEAPEQ RFTGTIVGSE DADPNRWKDS KWRCLKVRWD  360
ETSAIVRPER VSPWKIEHTL SPPVLNPVPV PRPKRPRSSV LPSSSETSVL TREGPTKMTA  420
DPAPANHGFP RVLQGQESST LRSPFSESIE LDSPEKSYLW KPTLEEEKID VSASRRYGAD  480
NWSPLGRPES SFTDLLSGFG SKTNAHRGFS MPIGNQSNPK RQTQECDAKF SLMGNIWSIM  540
PSGLSFNPMD SSTKNHVQGT DTSFLARGDS RHGAFRDFSM INDLRGDNQG ANWSMPPPVS  600
TYLQMRTSEP KELMPKPVFA EKQDTMKQKE GNCKLFGIPL ISKSAPSEPE ISNRNGLNSP  660
GFTPNSGHSH QFPAFELDQK SDQSKGLKAG DHGVAAGEQE NQFPSFPPSG TERETKGHSG  720
SSRSCTKVQK QGSALGRSVD LAKFNNYDEL ISELDDLFEF GGELKARNKN WLVVYTDDED  780
DMMLVGDDPW GEFCCMVRKL LILTKEEMLR MNPGSLNSKG EDTSSIADGV DANVQSFPSL  840
SPDDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein