PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY46640.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 486aa    MW: 53697.4 Da    PI: 6.4577
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY46640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3741.9e-1141134851374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalklfsevsPilkfs 94 
                 lv++L++cAeav+ +d + a+ lL+ l+ +a   g+++qR+a++f+++La rla  v+ l +   p+  + +n     s+++  al+l ++++P+++f+
  TEY46640.1 113 LVQQLISCAEAVACRDRAHASLLLSDLRARALVFGSAFQRVASCFVQGLADRLAM-VQPLGAVGYPTLPK-MNimdaaSEKKEEALRLVYDICPYIQFG 209
                 689***************************************************8.44444333333332.222345589999999************* PP

        GRAS  95 hltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                 h++aN+aIlea+ege+ vH++D++++    +G QW +L+++La+Rp+ pp +lR+T+vg     s+++  ++ge L+  A+e gv+fef+v v+++le+
  TEY46640.1 210 HFVANSAILEAFEGERLVHVVDLGMTlglpHGHQWRNLIHSLAKRPGAPPaRLRVTAVGL----SRDKFIAIGEELEARAAEAGVEFEFSV-VHSNLES 303
                 **********************98873333788*************77777*********....9*************************9.79***** PP

        GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                 l++e+ +v+ gE+++Vn +lqlh +++es    +   +vL++v +l Pkv+vvveq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ +  r+k+E+
  TEY46640.1 304 LKPEDVKVEVGEVVVVNTILQLHCVVKESRGALN---SVLQIVHELAPKVMVVVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAVLPKYDTRRAKMEQ 399
                 **************************88877777...8************************************************************* PP

        GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+pvpl+  +a+qak  l+ ++ ++gy+  ee+g++vlgWk++p++++S+W+
  TEY46640.1 400 FYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQPVPLK--IAAQAKQWLSSINaGEGYTTVEEKGCVVLGWKSKPIIAASCWK 485
                 *****************************************96..889**********9****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MAYSYSFLPH DSFDDNDFKN FPILDDHVIG AIWLPTLHDG AGDFKRLKKN PSLSELSDSS  60
SFIPRNSSAA SLSSSGPQIR DRIKSYSQLY LEAEALDGPG GEGAEGNADE MKLVQQLISC  120
AEAVACRDRA HASLLLSDLR ARALVFGSAF QRVASCFVQG LADRLAMVQP LGAVGYPTLP  180
KMNIMDAASE KKEEALRLVY DICPYIQFGH FVANSAILEA FEGERLVHVV DLGMTLGLPH  240
GHQWRNLIHS LAKRPGAPPA RLRVTAVGLS RDKFIAIGEE LEARAAEAGV EFEFSVVHSN  300
LESLKPEDVK VEVGEVVVVN TILQLHCVVK ESRGALNSVL QIVHELAPKV MVVVEQDSSH  360
NGPFFLGRFM EALHYYSAIF DSLDAVLPKY DTRRAKMEQF YFAEEIKNIV SCEGPARVER  420
HERVDQWRRR MSRAGFQPVP LKIAAQAKQW LSSINAGEGY TTVEEKGCVV LGWKSKPIIA  480
ASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17490.11e-70GRAS family protein