PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY46637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | C3H | ||||||||
Protein Properties | Length: 612aa MW: 68108.8 Da PI: 5.5097 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 37.7 | 3.4e-12 | 167 | 190 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 e C+f++++G Ck+G +CkF+H+p TEY46637.1 167 EDCSFYMKFGSCKFGLNCKFNHPP 190 89********************96 PP | |||||||
2 | zf-CCCH | 20.2 | 1e-06 | 213 | 236 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 + +C++++ CkyG Ck++Hg TEY46637.1 213 QTECKYYLTPAGCKYGKDCKYSHG 236 579********************8 PP | |||||||
3 | zf-CCCH | 38.6 | 1.8e-12 | 259 | 283 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +++C++++rtG CkyG +C+F+H++ TEY46637.1 259 EKECPYYMRTGSCKYGLNCRFHHPE 283 679********************96 PP | |||||||
4 | zf-CCCH | 30.8 | 5.1e-10 | 513 | 539 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++++C+ff +tG Ck+ ++CkF+H++ TEY46637.1 513 PGEPECSFFVKTGDCKFRSNCKFHHPK 539 5799*********************96 PP | |||||||
5 | zf-CCCH | 33.7 | 6e-11 | 562 | 586 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++++C +++r+G+CkyG+ Ck+ H+ TEY46637.1 562 DQPICTHYHRYGICKYGPACKYDHP 586 689*********************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 612 aa Download sequence |
MAESPPSTSE KPPIQKVVLG FLLEDTPLSD PINPEPEIPE NAPGGGSDPP KSAPEEVIGE 60 TAALDEEIEF LNAIERELSE LTIQQAHIEG VSERLVSIDE EEGGDVGKQK DGNDSESFEY 120 GNEIGEGDVD KEGNAAVNFG DGASKLGRFN QNNSRRRINY PMRPDAEDCS FYMKFGSCKF 180 GLNCKFNHPP RRKNPNIKER TNHREENSGR GGQTECKYYL TPAGCKYGKD CKYSHGSDRS 240 STSQTPEFNF LGLPIRIGEK ECPYYMRTGS CKYGLNCRFH HPEPVTVGGD SSSGYGNGGS 300 FPSQFVSSSS PTSWSSPRAF NENSPFVPVM FPPSPGAPTS KQDWNGYQVI FAYHPTAWFR 360 SVKLSVTVSV VDVFFKQTKP VSWIVEVMYG ILLLLFGELL LETFEVDMHT LAGLLLYLLL 420 CHNALANEWL HLAPKKGQVA VFSKVEIVKN KSLVYLCLIC FHFILDLFEA ATYSASEGLP 480 TPPAFALNNL PAEINFPMRH QPDILVEEYP ERPGEPECSF FVKTGDCKFR SNCKFHHPKS 540 RVFKGKPNTY TLSDKGLPLR PDQPICTHYH RYGICKYGPA CKYDHPSNFA ILPTPFEQPA 600 VMLEQGNESL EA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G63260.1 | 8e-48 | C3H family protein |