PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46074.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GeBP

Protein Properties

Length: 352aa MW: 40554.5 Da PI: 9.4163

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	44.6	4.2e-14	46	127	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +++se+D + lL+ l df a+ + s+ + +f++fvk+ +s +++++q++eKir+L +Kf+ + k s +h+ ++ lsk +W+ TEY46074.1 46 KIFSEDDVVCLLKRLADFWASGK---SNKWVEFHRFVKDDLSKEYTHRQVSEKIRSLNDKFHYARVK--------PSDPHEATVYMLSKLLWE 127 79**************66544...5799*****************************9998........6789***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAPKPQRDEF HSPHQVTNSK SGESEECFTP LKAKAGSGGK MSSNGKIFSE DDVVCLLKRL 60 ADFWASGKSN KWVEFHRFVK DDLSKEYTHR QVSEKIRSLN DKFHYARVKP SDPHEATVYM 120 LSKLLWEDEL NDQNKKRKPK KKRKTNTNET TLAFHESYNK TNEDDQANTI LASGESYKKI 180 KHNKKRKKTN EDEANTILSI AESYNKTDEG DHANTILATG ESYKKIKRNK KRKTNEDEAN 240 TILATGESYK KIKHNKKTKT NEDEANTIPA IGEGEREDEI GLDEFECEYP YLCASFKMPG 300 CPKLSIKERA SIGRKCAQEL EDEWRELKAQ QLRFELKKLT HPGDRFNKPK TN

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAPKPQRDEF HSPHQVTNSK SGESEECFTP LKAKAGSGGK MSSNGKIFSE DDVVCLLKRL  60
ADFWASGKSN KWVEFHRFVK DDLSKEYTHR QVSEKIRSLN DKFHYARVKP SDPHEATVYM  120
LSKLLWEDEL NDQNKKRKPK KKRKTNTNET TLAFHESYNK TNEDDQANTI LASGESYKKI  180
KHNKKRKKTN EDEANTILSI AESYNKTDEG DHANTILATG ESYKKIKRNK KRKTNEDEAN  240
TILATGESYK KIKHNKKTKT NEDEANTIPA IGEGEREDEI GLDEFECEYP YLCASFKMPG  300
CPKLSIKERA SIGRKCAQEL EDEWRELKAQ QLRFELKKLT HPGDRFNKPK TN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	181	RKPKKKRKTNTNETTLAFHESYNKTNEDDQANTILASGESYKKIK
2	140	184	RKPKKKRKTNTNETTLAFHESYNKTNEDDQANTILASGESYKKIK
3	141	185	RKPKKKRKTNTNETTLAFHESYNKTNEDDQANTILASGESYKKIK
4	184	188	KKRKK
5	224	268	RKPKKKRKTNTNETTLAFHESYNKTNEDDQANTILASGESYKKIK
6	230	259	KKRKTNEDEANTILATGESYKKIKHNKKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	2e-06	GeBP family protein