PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44796.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 402aa MW: 45097.6 Da PI: 6.7501

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	87.4	2.4e-27	77	231	1	148
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.......sseelaalklfsevsPilk 92 lv+ L++cA+ v+++++ +a+++ + e++sp+g+p+qRla+y+ eAL+a++ +++ + + +++++kn ++++ + ++++ +P+ + TEY44796.1 77 LVQNLMSCATSVAEKQHGRAKKFPEACGEMSSPTGSPLQRLAFYVSEALSAKIGL--ENTKHETNENKKRQKNavfrhlePTKRVGSIPAYYKEFPVTQ 173 6899***********************************************87..555555555555555544555444555555566***** PP GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvg 148 +++++ ++Il+ + +++++H D++i G+QW+ ++q as ++ +++RiT+v+ TEY44796.1 174 ITNIVGSHTILRYLGKARMIHAFDLEIRSGVQWVQFMQDVASGLgeNPVHHVRITTVA 231 *************************************998445555***996 PP
2	GRAS	21.3	2.8e-07	231	301	177	251
GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse 251 f v++++++ +l+ + + v+ +E+++V ++ l +l+ + le+ v ++++slsP ++ v+e ea++n++ TEY44796.1 231 AFGVVLVEDVLELDRDLFGVNADESVVVYASYILVTLVGRAERLEH----VTEVIRSLSPCIMLVTEMEANCNAP 301 588889999**************************955555555....********************975 PP
3	GRAS	58.7	1.2e-18	304	398	281	374
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 r+ +E l+ +i n++ +e+++r rh +l+ Wr+ ++++G+ + +ls + +qa+lllr+++ + ++ + g+l+ gWk+ +L+s+SaW+ TEY44796.1 304 SRVDIESTLFWSSINNALVAEEEDRMLRHVRLHVWRACFDSFGMVETELSFSSLDQANLLLRECSnGSSITMCRNGGCLIVGWKGTALTSLSAWK 398 68899**********************************************************444456668999***************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MYENGPMMHK VQLAEKGVIW CLLHWLQLVE APERLQGWKL DHASCLVFHC KDHQTAAGDY 60 VHSLSELSNE DSSDVRLVQN LMSCATSVAE KQHGRAKKFP EACGEMSSPT GSPLQRLAFY 120 VSEALSAKIG LENTKHETNE NKKRQKNAVF RHLEPTKRVG SIPAYYKEFP VTQITNIVGS 180 HTILRYLGKA RMIHAFDLEI RSGVQWVQFM QDVASGLGEN PVHHVRITTV AFGVVLVEDV 240 LELDRDLFGV NADESVVVYA SYILVTLVGR AERLEHVTEV IRSLSPCIML VTEMEANCNA 300 PKTSRVDIES TLFWSSINNA LVAEEEDRML RHVRLHVWRA CFDSFGMVET ELSFSSLDQA 360 NLLLRECSNG SSITMCRNGG CLIVGWKGTA LTSLSAWKVR NH

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MYENGPMMHK VQLAEKGVIW CLLHWLQLVE APERLQGWKL DHASCLVFHC KDHQTAAGDY  60
VHSLSELSNE DSSDVRLVQN LMSCATSVAE KQHGRAKKFP EACGEMSSPT GSPLQRLAFY  120
VSEALSAKIG LENTKHETNE NKKRQKNAVF RHLEPTKRVG SIPAYYKEFP VTQITNIVGS  180
HTILRYLGKA RMIHAFDLEI RSGVQWVQFM QDVASGLGEN PVHHVRITTV AFGVVLVEDV  240
LELDRDLFGV NADESVVVYA SYILVTLVGR AERLEHVTEV IRSLSPCIML VTEMEANCNA  300
PKTSRVDIES TLFWSSINNA LVAEEEDRML RHVRLHVWRA CFDSFGMVET ELSFSSLDQA  360
NLLLRECSNG SSITMCRNGG CLIVGWKGTA LTSLSAWKVR NH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01570.1	6e-22	GRAS family protein