PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44794.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 488aa MW: 54655.6 Da PI: 6.687

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	29.4	9.7e-10	151	205	1	55
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 lv+ Ll+cA+avs++++ +a+++L++ s+l+s + + +q l+ yf+e L+ r++ TEY44794.1 151 LVQDLLSCAQAVSNHNNDCASEFLKEFSKLSSGSTNVVQCLVYYFAESLRDRISP 205 6899*************************************************87 PP
2	GRAS	196	2.4e-60	207	481	94	374
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191 +++ q++l+ ++++ rvHi+D+++ Gl + L+qaLa+R++ p +l+iT+v++ +s+ + e e +g rL+++A++l+++f+f+v++++++ dl+ TEY44794.1 207 MQFAGVQTMLDHISSCARVHIVDLGLYGGLRHAVLMQALATRSGCPIqHLKITAVAA-QSHVQVEEEVVGVRLQNLAKSLNMSFSFHVITSEDILDLNQ 304 4567789**********************************66545*****.6677788899*************************** PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290 + Lr +p+++++V+ ++ l + +le ++ +v+sl+P+v++++e ea+ +s+ F++rf+eal ++ a fd le l + +r+ E +l+ TEY44794.1 305 SILRPDPEDTVVVQAAHILRFMI---PKLEI----LMLAVRSLNPHVMIIIEVEANVDSKVFVNRFVEALLFFGAGFDYLEHCLKDDLAARNYAESVLF 396 ************9887777...66666....999******************************************9999******* PP GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +++i+ +va+e++er+ r + Wr + ++G+ + +ls+ a + a+++l++++ d r+ + +sl+ gWk+ p++s+SaW+ TEY44794.1 397 SPSIRHIVAAEEEERKFRIVGINFWRGVFVRFGMAETELSKLALNHANSVLNMFDcCDSCRLGLDGNSLIVGWKGTPIFSLSAWK 481 ****************************************************9*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MQTYSFQGDE SICESDLFFY EELPTHFAAL RYLYLEKAFP SFQACSSNEP RDWQPSHEKK 60 RPCAFPSAAV EILRRCRSRT GAEEDGLKRD KAKGQSQQAP PPTLSVTQLI ELAMRSFTHS 120 DSKTGKDFHH SAVIHPNRAA FSRGKSEDIQ LVQDLLSCAQ AVSNHNNDCA SEFLKEFSKL 180 SSGSTNVVQC LVYYFAESLR DRISPVMQFA GVQTMLDHIS SCARVHIVDL GLYGGLRHAV 240 LMQALATRSG CPIQHLKITA VAAQSHVQVE EEVVGVRLQN LAKSLNMSFS FHVITSEDIL 300 DLNQSILRPD PEDTVVVQAA HILRFMIPKL EILMLAVRSL NPHVMIIIEV EANVDSKVFV 360 NRFVEALLFF GAGFDYLEHC LKDDLAARNY AESVLFSPSI RHIVAAEEEE RKFRIVGINF 420 WRGVFVRFGM AETELSKLAL NHANSVLNMF DCCDSCRLGL DGNSLIVGWK GTPIFSLSAW 480 KFQKIGAM

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MQTYSFQGDE SICESDLFFY EELPTHFAAL RYLYLEKAFP SFQACSSNEP RDWQPSHEKK  60
RPCAFPSAAV EILRRCRSRT GAEEDGLKRD KAKGQSQQAP PPTLSVTQLI ELAMRSFTHS  120
DSKTGKDFHH SAVIHPNRAA FSRGKSEDIQ LVQDLLSCAQ AVSNHNNDCA SEFLKEFSKL  180
SSGSTNVVQC LVYYFAESLR DRISPVMQFA GVQTMLDHIS SCARVHIVDL GLYGGLRHAV  240
LMQALATRSG CPIQHLKITA VAAQSHVQVE EEVVGVRLQN LAKSLNMSFS FHVITSEDIL  300
DLNQSILRPD PEDTVVVQAA HILRFMIPKL EILMLAVRSL NPHVMIIIEV EANVDSKVFV  360
NRFVEALLFF GAGFDYLEHC LKDDLAARNY AESVLFSPSI RHIVAAEEEE RKFRIVGINF  420
WRGVFVRFGM AETELSKLAL NHANSVLNMF DCCDSCRLGL DGNSLIVGWK GTPIFSLSAW  480
KFQKIGAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03450.1	1e-38	GRAS family protein