PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44541.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 464aa MW: 50990.1 Da PI: 7.0632

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30.9	6.8e-10	182	238	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + rk + g ++ +++Aa+ ++ a++k++g TEY44541.1 182 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEDKAARSYDLAALKYWG 238 57*****************4444.2344336655.7799999***********98 PP
2	AP2	50.1	7.1e-16	281	332	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TEY44541.1 281 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 332 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEMLNSSSSS SSSHQPNHSH HYYSFGDNFY TSGWPSHKSA ADDIHYMQQQ QQPPKLEDFF 60 AAAGDSTETQ DSSLTHIYDH HHHGAAYFDG GEQQDLKSII GFQAFSANSA SNVDDSPFAA 120 KTQSPVESAT ELAPYSHSPA TAAAANNGLS LDVCIDNNSN TNKAVVATDS KKIADTFGQR 180 TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ ARKGRQGGYD KEDKAARSYD LAALKYWGPT 240 ATTNFPMSTY AKEVEEMKHM TKQEFIASLR RKSSGFSRGA SIYRGVTRHH QQGRWQARIG 300 RVAGNKDLYL GTFATEEEAA EAYDIAAIKF RGINAVTNFE MNRYDVEAIA KSPLPIGGAA 360 KRLKHSLEGV DKALPLGSSS MLQTPCNSSG GSSISFAAIQ PSSGIPCGVP VDNSTPYYHH 420 NFFHHLYPND PVASDTSSSV SSLTTPMNMM PAPGEYFVWP HHTY

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEMLNSSSSS SSSHQPNHSH HYYSFGDNFY TSGWPSHKSA ADDIHYMQQQ QQPPKLEDFF  60
AAAGDSTETQ DSSLTHIYDH HHHGAAYFDG GEQQDLKSII GFQAFSANSA SNVDDSPFAA  120
KTQSPVESAT ELAPYSHSPA TAAAANNGLS LDVCIDNNSN TNKAVVATDS KKIADTFGQR  180
TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ ARKGRQGGYD KEDKAARSYD LAALKYWGPT  240
ATTNFPMSTY AKEVEEMKHM TKQEFIASLR RKSSGFSRGA SIYRGVTRHH QQGRWQARIG  300
RVAGNKDLYL GTFATEEEAA EAYDIAAIKF RGINAVTNFE MNRYDVEAIA KSPLPIGGAA  360
KRLKHSLEGV DKALPLGSSS MLQTPCNSSG GSSISFAAIQ PSSGIPCGVP VDNSTPYYHH  420
NFFHHLYPND PVASDTSSSV SSLTTPMNMM PAPGEYFVWP HHTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-137	AP2 family protein