PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44196.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 467aa MW: 50552 Da PI: 5.691

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.3	3.3e-17	147	196	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TEY44196.1 147 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 196 78*****************......55**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MLDLNVDAAS SGDEVDCGKA EAAADSVAST TTTSATNNAA ADEADCSSWS RDKSASTLNF 60 AILNNDVIEI EDDADNDAGN ELQLFPIADS PPSRSPAMVR AKYWLNLSVP EAGGLELGVN 120 KAASTPVQPP PPPQAKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA 180 HAAARAYDRA AIKFRGLDAD INFTTSDYDE EMKQVWTLEV YGQHLDSCDS VCAYEVGDLQ 240 MKGLTKEEFV HILRRQSNGF ARGSSKYRGV TLHKCGRWEA RMGQFLGKKA YDKAAIKSNG 300 REAITNFELS NYEFNSGNGG NGSSLDLNLG MSLSCEGQQG NEATRNPHFP VQSSELPDGK 360 RLKVEPSSAP QELMQMYPPM WASIYSGSAP NNKELASLAS GEAVPLPGYS SNWQWKMPSH 420 GMATPVPMSA SSAASSGFSP ATSPYFTSAV PLTNRAQFPS TAFHSLQ

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MLDLNVDAAS SGDEVDCGKA EAAADSVAST TTTSATNNAA ADEADCSSWS RDKSASTLNF  60
AILNNDVIEI EDDADNDAGN ELQLFPIADS PPSRSPAMVR AKYWLNLSVP EAGGLELGVN  120
KAASTPVQPP PPPQAKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA  180
HAAARAYDRA AIKFRGLDAD INFTTSDYDE EMKQVWTLEV YGQHLDSCDS VCAYEVGDLQ  240
MKGLTKEEFV HILRRQSNGF ARGSSKYRGV TLHKCGRWEA RMGQFLGKKA YDKAAIKSNG  300
REAITNFELS NYEFNSGNGG NGSSLDLNLG MSLSCEGQQG NEATRNPHFP VQSSELPDGK  360
RLKVEPSSAP QELMQMYPPM WASIYSGSAP NNKELASLAS GEAVPLPGYS SNWQWKMPSH  420
GMATPVPMSA SSAASSGFSP ATSPYFTSAV PLTNRAQFPS TAFHSLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	3e-74	AP2 family protein