PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY42816.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 180aa MW: 20089.8 Da PI: 10.4697 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.2 | 6e-05 | 50 | 72 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H+++H TEY42816.1 50 YVCSFCKREFRSAQALGGHMNVH 72 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MEKASNMKQM HHFKFKVPSF DFASDRNNSN PSSVDGDLVA AGFSWPPRSY VCSFCKREFR 60 SAQALGGHMN VHRRDRARLR QSPPRDGGGN GGQFSPLNLN LDPNPSFHPN PNLMKFPHFT 120 SKLPPTTPVT ADFMKVRAAR GFLGSSEIKK PGFVRLDLEI GLISPSSKEE LDLELRLGYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23130.1 | 1e-26 | C2H2 family protein |