PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY42571.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 356aa    MW: 40863 Da    PI: 4.1252
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY42571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF26.21e-0818501042
                HHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF 10 qvtfskRrngilKKAeELSvLCdaevaviifss 42
                   +  R++g+ KK e LS+LCd+ +++ii  +
  TEY42571.1 18 LAALKMRKEGLVKKIEQLSTLCDVPACMIIHDP 50
                556778***********************9755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MRRGKLKMEL VKKEKARLAA LKMRKEGLVK KIEQLSTLCD VPACMIIHDP STNFSFIWPD  60
DFFQVRRLID SFKANPTAVK PYGLSDFFKG RQKELAKTKY DDRLDLMNES QLRELDKAVR  120
SRIDLLKREA MAKKENDVVL DLEEFEHIDQ DDIFSAADAA MVKKENDVVL DLEEFEHIFS  180
ADDDVMAAND VFIDLDEIEE IDQDDIFSAA DDVMVKKENN VFIDLDKIEG LDQDDIFSAA  240
DDVMAAMVKE ENDVFIDLDE VEHIDQDAIF SAMSANTQLP VPDYYCPPPQ NQPTPFMDHN  300
YLNYVNWYAD QNLNCSSMDV KQNVNWCADQ DLNCSSMDVN WFTGDGGGVL ASYLWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.31e-11M-type_MADS family protein