PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY42216.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | WOX | ||||||||
Protein Properties | Length: 228aa MW: 25320.2 Da PI: 6.5127 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 49.3 | 8.5e-16 | 24 | 84 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ TEY42216.1 24 RSRWTPKPEQILILETIFNSgMVNPPKDETVRIRKLLekfgSVADANVFYWFQNRRSRSRR 84 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 106.9 | 1.3e-34 | 23 | 86 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G + d+NVfyWFQNr++R+r++q TEY42216.1 23 VRSRWTPKPEQILILETIFNSGMVNPPKDETVRIRKLLEKFGSVADANVFYWFQNRRSRSRRRQ 86 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MEDATASRQQ QQQQQGEAAE QPVRSRWTPK PEQILILETI FNSGMVNPPK DETVRIRKLL 60 EKFGSVADAN VFYWFQNRRS RSRRRQRQVQ ASLSAADHPS EIRYDHTFSP NPLSYPMPNS 120 GSSSSSSSSF GLEGHNSGCG IGLSGYPGLM QDFEQSPIFC HSQNQSQMMT VFVNGVATEV 180 GRGPVDVKAM FGGDFVVYHS SGLAVEMNEY GIVMQGLQHG ESYFLVNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 8e-34 | WOX family protein |