PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41610.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 900aa MW: 99423.7 Da PI: 4.8293

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.2	1.1e-14	747	790	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r rWT+++ el+++av+q+G++ ++ Ia+ ++ gRt++q+++++ k TEY41610.1 747 RVRWTKQDTELFYEAVQQFGTD-FSMIAQLFP-GRTREQIRNKYKK 790 78******************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 900 aa Download sequence
MPRINLYASS KRNQPTRNPF FSASILYLKP NFCALASRAL QLLELPIDDA YDDSGEPLVA 60 SQQAFWTHEQ SMGKVLVVDE IHFLIHFAAE VMNKLDVRHR SPTKPPVILG SKAFSQQAKF 120 SARFGSSTVG SGYIAMADDF DLFDDIFGNE PVKNARAAGK FRPKPKVQPQ KKVSAKSSVA 180 SSQAVQTVHS APHDSSEPIH TVKPPEKSSD MPNDKAEFHA VSVEESADVL IGSEAYTDSL 240 HYTDIGCTIP SSKEVASNSP NDENIGGRVG TQVFSSIDDS TNTCKMAEVT KDSELAARVD 300 ALGAGHVAKA DAFDPFDDIF DNEPVKNARV AGKFRPKSKF QPQKKVSAKS LVASSKEVQT 360 VHSAPHDSSE PIVKPLEQSE RAGTQVSSSI DDSTNTCNVA DATKEFDQAA EADALGAGEP 420 IVSSADVDMD GRLVIEEMDV MDSVMPDLNS LQQDSAENNS IPTSQNGDAV DLSSPGHTDT 480 FPTKSTSELP LDEESINLME VPLSDSCIHV EDLPEVPSKL ASRRAKTAKS KSSAASDKQQ 540 ASTLSQETGA AGRSVRSKKR DSSVGKLVDE EGDETLASGQ LSEEHPFSSA IDEQNINSEQ 600 PQVKNGSQKK NSKRKLKKTE NDKEKPPRKS KKAKEAPEQE TCTKPKKFSH STRRRRILDK 660 NLLNIPEEEF NPRELSFRNL ILLAEYKEKQ MKTTGQAAAP ATHQSTRNSD YNYEQAAGMY 720 NNDEEDGAHE DTTEYFNYQS RMEKTPRVRW TKQDTELFYE AVQQFGTDFS MIAQLFPGRT 780 REQIRNKYKK EERQYPLRLR EAFTNRSKDL SHFGKVIENL NKIREQEELE DCTSTEGVPD 840 EGVSNADDDG GKHEDGKKEE NEDAATDAAE VQSAAKPETE EYEEDELSRY SQIMSDLDFL

Sequence ? help Back to Top

Protein Sequence Length: 900 aa Download sequence

MPRINLYASS KRNQPTRNPF FSASILYLKP NFCALASRAL QLLELPIDDA YDDSGEPLVA  60
SQQAFWTHEQ SMGKVLVVDE IHFLIHFAAE VMNKLDVRHR SPTKPPVILG SKAFSQQAKF  120
SARFGSSTVG SGYIAMADDF DLFDDIFGNE PVKNARAAGK FRPKPKVQPQ KKVSAKSSVA  180
SSQAVQTVHS APHDSSEPIH TVKPPEKSSD MPNDKAEFHA VSVEESADVL IGSEAYTDSL  240
HYTDIGCTIP SSKEVASNSP NDENIGGRVG TQVFSSIDDS TNTCKMAEVT KDSELAARVD  300
ALGAGHVAKA DAFDPFDDIF DNEPVKNARV AGKFRPKSKF QPQKKVSAKS LVASSKEVQT  360
VHSAPHDSSE PIVKPLEQSE RAGTQVSSSI DDSTNTCNVA DATKEFDQAA EADALGAGEP  420
IVSSADVDMD GRLVIEEMDV MDSVMPDLNS LQQDSAENNS IPTSQNGDAV DLSSPGHTDT  480
FPTKSTSELP LDEESINLME VPLSDSCIHV EDLPEVPSKL ASRRAKTAKS KSSAASDKQQ  540
ASTLSQETGA AGRSVRSKKR DSSVGKLVDE EGDETLASGQ LSEEHPFSSA IDEQNINSEQ  600
PQVKNGSQKK NSKRKLKKTE NDKEKPPRKS KKAKEAPEQE TCTKPKKFSH STRRRRILDK  660
NLLNIPEEEF NPRELSFRNL ILLAEYKEKQ MKTTGQAAAP ATHQSTRNSD YNYEQAAGMY  720
NNDEEDGAHE DTTEYFNYQS RMEKTPRVRW TKQDTELFYE AVQQFGTDFS MIAQLFPGRT  780
REQIRNKYKK EERQYPLRLR EAFTNRSKDL SHFGKVIENL NKIREQEELE DCTSTEGVPD  840
EGVSNADDDG GKHEDGKKEE NEDAATDAAE VQSAAKPETE EYEEDELSRY SQIMSDLDFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	609	616	KKNSKRKL
2	614	632	RKLKKTENDKEKPPRKSKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	6e-38	MYB_related family protein