PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY41523.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 67aa    MW: 7438.66 Da    PI: 11.0391
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY41523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.42.6e-301059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                ri+n++nrqvtfskRrng+lKKA+ELS+LCdae+ +iifs+tgkl+++ss
  TEY41523.1 10 RIDNSTNRQVTFSKRRNGLLKKAKELSILCDAEIGLIIFSTTGKLHDFSS 59
                8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
MGRGKIMIRR IDNSTNRQVT FSKRRNGLLK KAKELSILCD AEIGLIIFST TGKLHDFSST  60
SIGNGEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.13e-33MIKC_MADS family protein