PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY41340.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 345aa    MW: 38024.5 Da    PI: 8.5588
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY41340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.49.3e-19254287134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C  tkTp+WR+gp g+ktLCnaCG++yr+ +
  TEY41340.1 254 CTHCEITKTPQWREGPLGPKTLCNACGVRYRSGR 287
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MAKVDPHGCW DGAIDGDDEL DNMLGSILDF PDFPMEGLEG ADWDASKSQY LGPIPMDVLL  60
GQPTVAQTKV DTGPPVFMQP IPMDVLMGQP AVAQTKVETE PPVFMHKPDA LIDATPQEKQ  120
HSYWFSEDAS GSCISQQNKS VEVQETVTFQ SQSPVSVLES SISSSTGKSL LKPHPAKRAR  180
SKRARPTGMS PWLVISPILP TSSRKTCNAK KTKERRKKPT HPPVAPKQMM EDSSQSSGYS  240
QPANAAQQRP IKKCTHCEIT KTPQWREGPL GPKTLCNACG VRYRSGRLFP EYRPAASPTF  300
VSTLHSNSHK KVIEMRNKGK KMEQPLMSPQ LEFIPVSSYL LDPIC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204219RKTCNAKKTKERRKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-40GATA family protein