PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41234.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 305aa MW: 33666.9 Da PI: 7.2511

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	29	52	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 + C+ C++sFs+ L H+++ H TEY41234.1 29 HYCKECDRSFSSGKALGGHMSSaH 52 68******************9988 PP
2	zf-C2H2	12.6	0.00042	83	102	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C++Cg++F ++ +L H+r TEY41234.1 83 SCNICGRVFQSQKSLFGHMR 102 8******************8 PP
3	zf-C2H2	16.2	2.9e-05	177	199	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cg++F++++ L H +H TEY41234.1 177 YRCDTCGRVFKSHEALGGHRASH 199 9***************9999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MEEGDSGRIP VIKIKIPKET GEEEDVPSHY CKECDRSFSS GKALGGHMSS AHVQANKEYS 60 MRKAMSFNSN SKSKSSPGSP TCSCNICGRV FQSQKSLFGH MRCHPEREWR GMEPPRDAKS 120 ESSEELGFFK AKAWPTCKRG RPSLAAAMEE EKEKEKVDEM VKVAVQVLAS GKMERKYRCD 180 TCGRVFKSHE ALGGHRASHN KFMMTIINTS TRHLEPKNMP KAKKKKMMLI KPDSVTSDHV 240 DGDGDSASVL ASTITPTSAS TITPTLASGF GFDIDLNMSP PGEEEEEEVE DKGMEESSND 300 TSSRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	8e-17	C2H2 family protein