PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41083.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 694aa MW: 76624.6 Da PI: 7.4356

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.4	2.7e-23	109	210	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + ++ +d +g +W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + +++ l TEY41083.1 109 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--NVIAKDVHGDTWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAENGDL 203 89***************************97656666..699******************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY41083.1 204 CVGIRRA 210 **997 PP
2	Auxin_resp	114.5	9.9e-38	270	350	4	83
Auxin_resp 4 aastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+++++FevvY+Prast+eF+v++++v++a++v++++GmRfkm fetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ TEY41083.1 270 LAANGQPFEVVYYPRASTPEFCVRASSVSAAMRVHWCAGMRFKMPFETEDSSRISWfMGTIASVQVVDPLRWPNSPWRLLQ 350 6899***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MGERSLDSEL WHACAGGMVQ MPPVNSKVFY FPQGHAEHTL TSVDFGALPK FPPMILCRVA 60 AVKYLADPDT DEVYGKIRLI PVGKNEHGFD DGGVLGNNGS ASNEKPTSFA KTLTQSDANN 120 GGGFSVPRYC AETIFPRLDY SADPPVQNVI AKDVHGDTWK FRHIYRGTPR RHLLTTGWST 180 FVNQKKLVAG DSIVFLRAEN GDLCVGIRRA KRSGVGGEPS SGWNSGGAGN FGFSSFLKED 240 ESRLMHRVGS GNMREKGKVR PESVVEATFL AANGQPFEVV YYPRASTPEF CVRASSVSAA 300 MRVHWCAGMR FKMPFETEDS SRISWFMGTI ASVQVVDPLR WPNSPWRLLQ VTWDEPDLLQ 360 NVKCVSPWLV EMVSNMPTIL HLSPFSPPRK KLRLQQHSDF SLDGQFPMPS FSGTPLGPSS 420 PLSLSDNITA GIQGARHAQM GIPLSDFHLS NKLQMGLLPP SFLRLDPHAK IPNRMARSHV 480 DSKENISCLL SIGSATQNSE KTGDVKTPRF VLFGQTILTE QQMANDCSSE VASKVTEEKN 540 SGGTPWKNGS FALDREDLPN NFSDSQFLWK QGYNTSDLSL DTGHCKVFLE SEDVGRTLDL 600 SVLGSYEELH KRLEEMFGFE RSEMLSHVYY RDAAGAIKQA GDEPFSEFMK NAKRLTIRMK 660 PSSNNSERKF ITGLPTAERG LDSSNQAGAL SIFA

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MGERSLDSEL WHACAGGMVQ MPPVNSKVFY FPQGHAEHTL TSVDFGALPK FPPMILCRVA  60
AVKYLADPDT DEVYGKIRLI PVGKNEHGFD DGGVLGNNGS ASNEKPTSFA KTLTQSDANN  120
GGGFSVPRYC AETIFPRLDY SADPPVQNVI AKDVHGDTWK FRHIYRGTPR RHLLTTGWST  180
FVNQKKLVAG DSIVFLRAEN GDLCVGIRRA KRSGVGGEPS SGWNSGGAGN FGFSSFLKED  240
ESRLMHRVGS GNMREKGKVR PESVVEATFL AANGQPFEVV YYPRASTPEF CVRASSVSAA  300
MRVHWCAGMR FKMPFETEDS SRISWFMGTI ASVQVVDPLR WPNSPWRLLQ VTWDEPDLLQ  360
NVKCVSPWLV EMVSNMPTIL HLSPFSPPRK KLRLQQHSDF SLDGQFPMPS FSGTPLGPSS  420
PLSLSDNITA GIQGARHAQM GIPLSDFHLS NKLQMGLLPP SFLRLDPHAK IPNRMARSHV  480
DSKENISCLL SIGSATQNSE KTGDVKTPRF VLFGQTILTE QQMANDCSSE VASKVTEEKN  540
SGGTPWKNGS FALDREDLPN NFSDSQFLWK QGYNTSDLSL DTGHCKVFLE SEDVGRTLDL  600
SVLGSYEELH KRLEEMFGFE RSEMLSHVYY RDAAGAIKQA GDEPFSEFMK NAKRLTIRMK  660
PSSNNSERKF ITGLPTAERG LDSSNQAGAL SIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein