PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY40462.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 679aa MW: 76179.1 Da PI: 6.6589

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY40462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.1	7e-23	127	226	1	97
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k+lt sd++++g +++ +k+a+e+ +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + +++el+v TEY40462.1 127 FCKILTASDTSTHGGFSVLRKHANECippldMSQPTPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSMFVTSKRLAAGDCFVFL--RGDNGELRV 223 99**************************9777777889********************************************..3489999 PP EEE CS B3 95 kvf 97 +++ TEY40462.1 224 GIR 226 997 PP
2	Auxin_resp	100.7	1.9e-33	253	332	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F++ ++k+++a+k+ +svGmRfkm+fe+eds+err++Gt++g d+++ +W++S WrsLk TEY40462.1 253 ASHAITTQTLFVVYYKPRT--SQFIIGLNKYLEAMKHGFSVGMRFKMRFEGEDSPERRFTGTITGFGDFSS-QWTESAWRSLK 332 789*************6..9******************************************888.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MAHADGLISG GSHERGVGGD DLYTELWKAC AGPLVDVPRV GERVYYFPQG HMEQLEASTN 60 QELNQQIPHF NLPPKILCRV VYIQLKAEPE TDEVYAQITL QPEPDQTEPT SPDPSPPDPP 120 KPSVQSFCKI LTASDTSTHG GFSVLRKHAN ECIPPLDMSQ PTPTQDLVAK DLHGYEWRFK 180 HIFRGQPRRH LLTTGWSMFV TSKRLAAGDC FVFLRGDNGE LRVGIRHLAR HQSSMPPSVI 240 SSQSMHLGVL ATASHAITTQ TLFVVYYKPR TSQFIIGLNK YLEAMKHGFS VGMRFKMRFE 300 GEDSPERRFT GTITGFGDFS SQWTESAWRS LKVQWDEPAT ILRPDRVSLW EIEPFVASAS 360 VDASQPAMKI KRPRPLDLPL NETTTASAAS PVWYQKSTTS LELSHLTSNS DVQSSEKQVF 420 WPPKQKDHHC SLPSGSLSLF RESTNDNKNV LLHYALPNYH SPVSSGTSNC PDHIKRSETA 480 PACRLFGFDL RNNSNKIPPP LETEAPFPRP STIPDCDLPP KRPETDEKPG VDLLASSKER 540 HDAQMEAHPN DTQGPQDYVS SSRTRIKVQM QGIAVGRGMD LSAFRGYDDL LEELESMFDI 600 KGELRPRRKW EVVYTDNEGD MMLVGDDPWK EFCKMAKKIC IYSSDEVKKM RPRCKLPISS 660 SECEATTIIS SESQPKLEA

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MAHADGLISG GSHERGVGGD DLYTELWKAC AGPLVDVPRV GERVYYFPQG HMEQLEASTN  60
QELNQQIPHF NLPPKILCRV VYIQLKAEPE TDEVYAQITL QPEPDQTEPT SPDPSPPDPP  120
KPSVQSFCKI LTASDTSTHG GFSVLRKHAN ECIPPLDMSQ PTPTQDLVAK DLHGYEWRFK  180
HIFRGQPRRH LLTTGWSMFV TSKRLAAGDC FVFLRGDNGE LRVGIRHLAR HQSSMPPSVI  240
SSQSMHLGVL ATASHAITTQ TLFVVYYKPR TSQFIIGLNK YLEAMKHGFS VGMRFKMRFE  300
GEDSPERRFT GTITGFGDFS SQWTESAWRS LKVQWDEPAT ILRPDRVSLW EIEPFVASAS  360
VDASQPAMKI KRPRPLDLPL NETTTASAAS PVWYQKSTTS LELSHLTSNS DVQSSEKQVF  420
WPPKQKDHHC SLPSGSLSLF RESTNDNKNV LLHYALPNYH SPVSSGTSNC PDHIKRSETA  480
PACRLFGFDL RNNSNKIPPP LETEAPFPRP STIPDCDLPP KRPETDEKPG VDLLASSKER  540
HDAQMEAHPN DTQGPQDYVS SSRTRIKVQM QGIAVGRGMD LSAFRGYDDL LEELESMFDI  600
KGELRPRRKW EVVYTDNEGD MMLVGDDPWK EFCKMAKKIC IYSSDEVKKM RPRCKLPISS  660
SECEATTIIS SESQPKLEA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	371	375	KRPRP
2	605	609	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	0.0	ARF family protein