PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY40294.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 711aa MW: 78235 Da PI: 7.8522

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY40294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.3	1.7e-24	150	251	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++el+ TEY40294.1 150 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR--GGDGELR 245 99**************************963.3445679*********************************************3..378999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ TEY40294.1 246 LGIRRA 251 **9986 PP
2	Auxin_resp	107.4	1.6e-35	276	357	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a++t+++F+++YnPr+ +s+ +v+ +k+ k+l++++s GmRfk++fetedss rr+sG++vgvsd+dp rWp+SkW++L TEY40294.1 276 VMNAITTRTTFDICYNPRVRSSDIIVPHHKFCKSLTQNFSCGMRFKIRFETEDSSDRRCSGLIVGVSDVDPARWPGSKWKCL 357 6799*****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence
MVMCGMIDLN TVDNEDEIAS PCGSPSSSAA SGNLELATPP PSVSMELWHA CAGPLISLPK 60 RGSAVVYFPQ GHVEFLPDHP AVAYDLPPHV FCRVVDVKLH ADAASDEVYS QVSLVPDQQI 120 EQKWGEGIME SEVEDEDVEG VGKTTTPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD 180 YKQQRPSQEL VAKDLHGIEW KFRHIYRGQP RRHLLTTGWS AFVNKKKLVS GDAVLFLRGG 240 DGELRLGIRR AAQIKSGATV LPATSQQFNA SSIAAVMNAI TTRTTFDICY NPRVRSSDII 300 VPHHKFCKSL TQNFSCGMRF KIRFETEDSS DRRCSGLIVG VSDVDPARWP GSKWKCLLVR 360 WDDMEVNSLN RVSPWEIDVA GPMSGPNSFA LPGTKRNRIG FPTAKPDAPV HRDGSDVSDF 420 GEPLRFQKVL QGQEVFPFGS PYAGAEASRN HLSDIRGYPS LSTFNAGGNS IRKHHADARN 480 SSTVGESFQF RKVLQGQETM PILSYGRGPQ EKNAYNGIQV PRNGTCWSTA PQYNASPRLP 540 SSMVRGLSPS SVLLLQQSSP QSSQITSLLH GYKNKHETSY QDSFRVPQRI TNKFAPYETG 600 PKDNVQHGYR SHGATEAHNS PTLSTPRPLL TQPLFRDSQN FVSMCKDSCR LFGFSLTEGN 660 NEAAASASAY SHGNQEEQLH QPPLVAKVMV SSCTKPRDLH AVRDRLLDIA L

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence

MVMCGMIDLN TVDNEDEIAS PCGSPSSSAA SGNLELATPP PSVSMELWHA CAGPLISLPK  60
RGSAVVYFPQ GHVEFLPDHP AVAYDLPPHV FCRVVDVKLH ADAASDEVYS QVSLVPDQQI  120
EQKWGEGIME SEVEDEDVEG VGKTTTPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD  180
YKQQRPSQEL VAKDLHGIEW KFRHIYRGQP RRHLLTTGWS AFVNKKKLVS GDAVLFLRGG  240
DGELRLGIRR AAQIKSGATV LPATSQQFNA SSIAAVMNAI TTRTTFDICY NPRVRSSDII  300
VPHHKFCKSL TQNFSCGMRF KIRFETEDSS DRRCSGLIVG VSDVDPARWP GSKWKCLLVR  360
WDDMEVNSLN RVSPWEIDVA GPMSGPNSFA LPGTKRNRIG FPTAKPDAPV HRDGSDVSDF  420
GEPLRFQKVL QGQEVFPFGS PYAGAEASRN HLSDIRGYPS LSTFNAGGNS IRKHHADARN  480
SSTVGESFQF RKVLQGQETM PILSYGRGPQ EKNAYNGIQV PRNGTCWSTA PQYNASPRLP  540
SSMVRGLSPS SVLLLQQSSP QSSQITSLLH GYKNKHETSY QDSFRVPQRI TNKFAPYETG  600
PKDNVQHGYR SHGATEAHNS PTLSTPRPLL TQPLFRDSQN FVSMCKDSCR LFGFSLTEGN  660
NEAAASASAY SHGNQEEQLH QPPLVAKVMV SSCTKPRDLH AVRDRLLDIA L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein