PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY39479.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 729aa    MW: 82183.4 Da    PI: 5.505
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY39479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS370.81.8e-1133557261374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL  cA+av+++d + a+++L++++++++ +gd mqRla yf+ +L+ar+a+ ++ +y+ +++ +ts    s+ l a++++  ++P+ k+s++ aN
  TEY39479.1 355 LRTLLSLCAQAVAADDRRTANEFLKQIRQHSTRTGDGMQRLACYFADGLEARMAGYGDPVYACVNALPTS---ASDILRAYHILIATCPFRKISNFFAN 450
                 5789999*******************************************************99999999...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I++  e+++r+Hi+Df+i +G+QWp+++q L++Rp+gpp+lRiTg++ p +g   + ++ee g+rLa +Ae++gvpfefn+ +a+++e+++le+L++
  TEY39479.1 451 KTIMNVSEKATRIHIVDFGIFYGFQWPSFMQRLSNRPGGPPKLRITGIDFPCPGfrPAARVEEAGRRLAGYAETFGVPFEFNA-IAQKWETIRLEDLKI 548
                 ***************************************************99999***************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E l+V++ ++  +llde+v ++s+r+ vL+l+k+++P v+v    + ++n++ F +rf ea+ +ys++fd+l++ +pre +er+ +Er ++g+e+v
  TEY39479.1 549 EKDELLVVSCLFRFRNLLDETVVVNSPRNIVLSLIKKMNPAVFVQGVVNGSYNAPFFITRFREAMFHYSSIFDMLDTIIPREIHERMLLERTVFGQEAV 647
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv++cegaer+er et+++W+ r ++aGF ++pl+++++k ak  ++  + + + ++++ +++++gWk+r ++++S+Wr
  TEY39479.1 648 NVISCEGAERIERPETYKQWQVRNMRAGFVQLPLDKEIVKMAKNRVKLSYHKDFVIDQDGQWMLQGWKGRIIYALSSWR 726
                 **************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MRSNNEALHV FPNANVISDL RISDRFFNGN IADNSRHTSS QFSFDTGVQS REDDSPEDFD  60
FNDGVLKFIN HILMEEDVED KTCMFQESAA LQAAEKSFHE ALAEQRPASS DNHPVPNLDQ  120
GVESPDEKFL EESRSNVYDP SDVEVFSPDW FYDPDFNGYN GHHITVDVLS TCQSSYSSSS  180
SNGTFADGPV DSPVSILKNA DVFSNQESAM QFMKGAEEAS RFLPCGSNLI TGVRNDESRE  240
RAKKVGSTSV AVKLEQRSDE ETLDIPRGKK NPYRETSGLQ EERSSKQSAI YSDTTLSDDM  300
FDLVLLCSGG KNESALRKEL SEVTKSTPQE DQPEGVNGGK IQGKKKGGRR SVVDLRTLLS  360
LCAQAVAADD RRTANEFLKQ IRQHSTRTGD GMQRLACYFA DGLEARMAGY GDPVYACVNA  420
LPTSASDILR AYHILIATCP FRKISNFFAN KTIMNVSEKA TRIHIVDFGI FYGFQWPSFM  480
QRLSNRPGGP PKLRITGIDF PCPGFRPAAR VEEAGRRLAG YAETFGVPFE FNAIAQKWET  540
IRLEDLKIEK DELLVVSCLF RFRNLLDETV VVNSPRNIVL SLIKKMNPAV FVQGVVNGSY  600
NAPFFITRFR EAMFHYSSIF DMLDTIIPRE IHERMLLERT VFGQEAVNVI SCEGAERIER  660
PETYKQWQVR NMRAGFVQLP LDKEIVKMAK NRVKLSYHKD FVIDQDGQWM LQGWKGRIIY  720
ALSSWRPAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein