PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38838.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 407aa MW: 44413.6 Da PI: 7.1327

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.3	8.9e-16	264	309	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K++Ka++L +++eY+k+Lq TEY38838.1 264 HNQSERKRRDKINQRMKTLQKLVPNS-----SKNDKASMLDEVIEYLKQLQ 309 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MLCSYLYEYI THLLSLIYFS PNAQTLLINF LSFKMNQCVP SCDLDDCSKI KYKSSSPQDV 60 PSLEYEVAEL TWENGQLAMH GLGVPRVVGK QSASSSPATW DKPRAGGTLE SVVNQATFYP 120 PPPAADLMPW FESHCAMANP GPTGSVTATM DALVPCAKNV HERQEHAAAC STRVGSCSGA 180 AAPLDVARES VQTFGGAGFT STTSMENTIS GQEYTKTSAD DRDSVSLHSR SRASDRNGEE 240 EEGRRRDNGK SSVCTKRSRA AAIHNQSERK RRDKINQRMK TLQKLVPNSS KNDKASMLDE 300 VIEYLKQLQA QVHMMSRMNM PSMMFPLAMQ QQQLQMSMMG CMGMGMGMGM GVMDMNTIPR 360 PQPTAGFMPV PPTTWNNGGG DCLLPPPPPM PDPLSALLAC QSQVSTF

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MLCSYLYEYI THLLSLIYFS PNAQTLLINF LSFKMNQCVP SCDLDDCSKI KYKSSSPQDV  60
PSLEYEVAEL TWENGQLAMH GLGVPRVVGK QSASSSPATW DKPRAGGTLE SVVNQATFYP  120
PPPAADLMPW FESHCAMANP GPTGSVTATM DALVPCAKNV HERQEHAAAC STRVGSCSGA  180
AAPLDVARES VQTFGGAGFT STTSMENTIS GQEYTKTSAD DRDSVSLHSR SRASDRNGEE  240
EEGRRRDNGK SSVCTKRSRA AAIHNQSERK RRDKINQRMK TLQKLVPNSS KNDKASMLDE  300
VIEYLKQLQA QVHMMSRMNM PSMMFPLAMQ QQQLQMSMMG CMGMGMGMGM GVMDMNTIPR  360
PQPTAGFMPV PPTTWNNGGG DCLLPPPPPM PDPLSALLAC QSQVSTF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	273	ERKRRD
2	269	274	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	3e-75	bHLH family protein