PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY38358.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 566aa    MW: 62100.5 Da    PI: 7.1923
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY38358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.11.9e-24121222199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f k+lt+sd+++ g +++p+ +ae++        +++ +  t+ ++d +g +W++++iyr++++r++lt+GW++Fv+ ++L +gD++vF   + +++el
  TEY38358.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILVRDVHGAVWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFL--RADNGEL 215
                 89****************************986545444..8************************************************..4489999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +v+++r+
  TEY38358.1 216 CVGIRRA 222
                 *****97 PP
2Auxin_resp110.22.2e-36282365183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 aa+ a+++++FevvY+Pra+++eFvv+ + v++a++v++++ mRfkmafetedss++++ +Gt+++v+  dp++WpnS+Wr+L+
  TEY38358.1 282 AASVAANGQPFEVVYYPRAGSPEFVVRESAVRAAMRVQWCPRMRFKMAFETEDSSRISWfMGTISSVQVDDPIHWPNSPWRLLQ 365
                 68899*****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 566 aa     Download sequence    
MINVMHSLSK PMNQMESCLD PQLWHACAGG MAQIPPPNSK VYYFPQGHAE HANENVDFLK  60
FPRIAPLMLC RVESIKYLAD SESDEVFAKI RLVPLLGNES GVCDDGGRVD GNEEREKTNS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT ILVRDVHGAV WKFRHIYRGT  180
PRRHLLTTGW SNFVNHKKLV AGDSIVFLRA DNGELCVGIR RAKRGIGGGA EVLSGWNTGI  240
PALQGGFSGF LGESVGLCRR RGGGEMGLKE KGNVKAKVVV EAASVAANGQ PFEVVYYPRA  300
GSPEFVVRES AVRAAMRVQW CPRMRFKMAF ETEDSSRISW FMGTISSVQV DDPIHWPNSP  360
WRLLQVVWDE PDLLHNVKRV NPWLVELVLN MAAGHGLSRF SPPRKRPRPP LPTEFQLPMG  420
TLVTNPFSPS SPLCCLPDHI PAGVQGARHA QSEKLQPFDF KLLDYAAQSP TLLTSYPLPN  480
PNCDASLRMG SSPHEVKKSN EAKAPMFLLF GQPILNAEQI SQSHSADTEG DSSDGNQENT  540
ANASNASGSA VIQNFPPEAS SDGEFP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1405409KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.11e-172ARF family protein