PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY38267.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 155aa MW: 17148.3 Da PI: 8.2026 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135.1 | 2.6e-42 | 12 | 110 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++Cv+apyfp e+p kf nvhk+FGasnv+kll+++ +++reda++sl+yeAear++dPvyG++g i+ lq+q+ +l++el+++++ TEY38267.1 12 PCAACKFLRRKCLSGCVFAPYFPPEDPTKFVNVHKIFGASNVSKLLNEILPHQREDAVNSLAYEAEARLKDPVYGCIGAISVLQRQVLHLQKELEATNA 110 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MASSSSSYSN PPCAACKFLR RKCLSGCVFA PYFPPEDPTK FVNVHKIFGA SNVSKLLNEI 60 LPHQREDAVN SLAYEAEARL KDPVYGCIGA ISVLQRQVLH LQKELEATNA DLMRYTSNEI 120 VVYHQRRMAY GSGAGSYNPH PGYYSYGENP GHGTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27650.1 | 8e-68 | LBD family protein |