PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38197.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 288aa MW: 29974.1 Da PI: 6.4164

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	86.9	4.7e-27	1	119	24	124
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..............kaaksaakskksqksaasa 107 ++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + ++++ + +++ ++ a+ TEY38197.1 1 MPAVCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrstyfspsyamSQRRGLFPLSSDASPGATL 99 9**********************************************9998777777777766666666677777777753333333666666666666 PP TCP 108 lnlakesr...akararare 124 ln++++ + +a+++are TEY38197.1 100 LNFQANLNpslMQAKQEARE 119 66666444333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MPAVCAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG 60 SSMSVPSQLR STYFSPSYAM SQRRGLFPLS SDASPGATLL NFQANLNPSL MQAKQEAREN 120 SIDLTELDDG MGRKRRAEQE IHPQQHQMGS YLLQSSTGAM PASHASIPAN FWMVANSNNN 180 QVIGGDPIWT FPSINNSNAA AALYRGSVSS GLHFMNFPAP VALLPSQQLG GGGGGNGMGE 240 GQLGMLAGLN QYRGGGGGGG GGGGMSDSQA SGSHGGGDDR HEDTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	2e-45	TCP family protein