PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY37253.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 906aa    MW: 100555 Da    PI: 6.4811
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY37253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.43.3e-24132233199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ ae+       ++ ++++ +l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD v+F   ++++ +l+
  TEY37253.1 132 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLTPPCQ-ELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFI--WNENNQLL 227
                 99*****************************98888886.9************************************************..7888889* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 ++++r+
  TEY37253.1 228 LGIRRA 233
                 ***997 PP
2Auxin_resp116.71.9e-38258341183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras++eFv+++ k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++gvsd+dpvrWpnS+Wrs+k
  TEY37253.1 258 AAHAAATNSRFTIFYNPRASPTEFVISLVKYAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGVSDIDPVRWPNSHWRSVK 341
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 906 aa     Download sequence    
MRLSSSPTST GFNAQTEEGE TKCLNSELWH ACAGPLVSLP LIGSRVVYFP QGHSEQVAAS  60
TNKEVDSAIP SYPGLQPQLI CQLHNVTMHA DIETDEVYAQ MTLQPLTTQE QKDLCLLPAE  120
LGTPNKQPTN YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDFSLTPPCQ ELIAKDLHGN  180
EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDAVIFIW NENNQLLLGI RRAQRPQTVM  240
PSSVLSSDSM HIGLLAAAAH AAATNSRFTI FYNPRASPTE FVISLVKYAK AVYHTRVSVG  300
MRFRMLFETE ESSVRRYMGT ITGVSDIDPV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE  360
IEPLMTFPMY PSPFSLRLKR PWPSALPSFP GVGDGDMSLN SPLTWLRGGG GIGDQGMQSL  420
NFQRFGMSPF MQQPRLDNSM LGLQPDMYHS MASNSFQDAL SLDPSKVPNQ LLLQLQQNVS  480
ASPIQNQMLQ QSNPQQTFVQ NFPENVMSQA QMLHQQLELH QQFKDQQEQQ LQQHEQRVQQ  540
SQQMHQHLQD QQNKTTIQHG PRMGQASQHQ LSPLQAMAST SQLHNFSDLI GNHVSSSNAP  600
SMPQNLLTSF SNEGMVNWHG PNNTLVSHSS SSKRVALDPQ LPPKVSQFGM LHPDELVTPG  660
PKLPDLSALL PPFPEREFLG LQGASDSHNK SPYGVTTDSS SAMMLNGLSS SFSNTGNENG  720
SFSMPYATPA FVSAAGTEFP RNSEMTSSSC VDESGYLQAS ENADQTNPPP GTFVKVHKTG  780
SFGRSLDISK FSSYNELRSE LAQLFRLEGL LDDRQRSGWQ LVFVDRENDI LLLGDDPWQE  840
FVNSVSCIKI LSPNEVQHMG KEGLDLPNTS QSQVLPNNGS SCDDRTSHKE SRGSFNRIPS  900
VGLFDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein