PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY36481.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 487aa MW: 52919.1 Da PI: 7.4788

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY36481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.5	1.1e-23	171	214	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrC+RtDGKkWRCsr+v + +k+CErHlhrgr rsrk++e TEY36481.1 171 DPEPGRCKRTDGKKWRCSREVAPHQKYCERHLHRGRPRSRKPVE 214 79***************************************998 PP
2	QLQ	50.5	6.1e-18	113	145	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT aQ+ +L++Q+++yKy+++++PvPp+Ll++ TEY36481.1 113 PFTFAQWKELERQAMVYKYMISSVPVPPDLLFP 145 8*****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MSRLEKVATP NRECSTLENK SSSGNDVVRL KKMMSCHRRE VNLGRPFDGG GCGPNSCSSG 60 GTTEAVGHAY GDDFRLGGEN FATSGPTNIF AAAAYCAAPY KSPEEMAVAS AFPFTFAQWK 120 ELERQAMVYK YMISSVPVPP DLLFPHSRNF SAAPLDCAAS LYNVRYSRNG DPEPGRCKRT 180 DGKKWRCSRE VAPHQKYCER HLHRGRPRSR KPVEVKNNGE NLKKARTEKS HVPSSTTVSA 240 TQFAAGNDNK PLLLFNAKND PSVSVAPSSY KGPTRNSSLM MEGQMDGSDQ RWRHLIESNM 300 GFVNVGTSSV NDSSSLFAQD YLEQQQQSLN MLSYSNLSAP EVNTPIGFID AWSINNLDGS 360 NSGNTESSMT TNHGNLSPSL NLSIAMAAGD IVDHAMRIIE CFDEKDPRWI DPLYWEPFAR 420 GGPLAEALQP GSVAISSCYS ISAPATNVSS PTGVLHRTTL FSHSDGSVCS SPVPAAPTTE 480 IAFNGLY

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MSRLEKVATP NRECSTLENK SSSGNDVVRL KKMMSCHRRE VNLGRPFDGG GCGPNSCSSG  60
GTTEAVGHAY GDDFRLGGEN FATSGPTNIF AAAAYCAAPY KSPEEMAVAS AFPFTFAQWK  120
ELERQAMVYK YMISSVPVPP DLLFPHSRNF SAAPLDCAAS LYNVRYSRNG DPEPGRCKRT  180
DGKKWRCSRE VAPHQKYCER HLHRGRPRSR KPVEVKNNGE NLKKARTEKS HVPSSTTVSA  240
TQFAAGNDNK PLLLFNAKND PSVSVAPSSY KGPTRNSSLM MEGQMDGSDQ RWRHLIESNM  300
GFVNVGTSSV NDSSSLFAQD YLEQQQQSLN MLSYSNLSAP EVNTPIGFID AWSINNLDGS  360
NSGNTESSMT TNHGNLSPSL NLSIAMAAGD IVDHAMRIIE CFDEKDPRWI DPLYWEPFAR  420
GGPLAEALQP GSVAISSCYS ISAPATNVSS PTGVLHRTTL FSHSDGSVCS SPVPAAPTTE  480
IAFNGLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	6e-37	GRF family protein