PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY35653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | GATA | ||||||||
Protein Properties | Length: 305aa MW: 33487.2 Da PI: 6.4139 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 52.2 | 8.2e-17 | 202 | 236 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C + kTp+WR gp g+ktLCnaCG++y++ +l TEY35653.1 202 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 236 99*****************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MEYFAADYAE FSSVDNGNNN NAVHFTVDDL LDFSKEDETM TNAFFESLPV NSGDSSTVTA 60 VDSCNSSVSG GGDGQFNGNI SCRSYNESQF SGNELCVPYD DLTELEWLSN FVEESFSTDD 120 HRLIPTTTTA AAAKAVSTDT SSSFITSQSP PPPPPSVFPS DVSVPGKARS KRSRAPPCDW 180 SSRLLLVKTA PPSKPEAPAR KCLHCASEKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY 240 RPAASPTFIS ARHSNSHRKV MELRRQKDVM QRQQMIGGVF NGCDEFLIHH RSSINGHDLR 300 HMMMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 9e-66 | GATA family protein |