PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY35420.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 471aa    MW: 52249.4 Da    PI: 4.8342
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY35420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS258.91.9e-791284692373
        GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 v+ L++ Ae++++++l+l + + arl ++ +sp+g+p+qR+a+yf+eAL++ l++         ++++    + +++++a+k+fs +sPi+ fs +ta 
  TEY35420.1 128 VDELIQLAECLETNSLQLGHVIAARLDQRlQSPSGKPLQRAAFYFKEALETLLTG---------STRSP---DLIQTIKAQKTFSTISPIPMFSGFTAT 214
                 678*************************99*************************.........34444...599************************ PP

        GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 q +l+a++g+ ++vH++Df+i+ G++W+++++++++ ++g+p lRi +++ ++   + e   ++e+L++fA+el+v fe++++  +++e+l +++ +++
  TEY35420.1 215 QVVLDAMDGCaTAVHVVDFEIGLGGHWASFIREISE-ERGKPALRISALVTED--FSAESTLVRENLTQFARELNVVFEIDFVPIRNFECLYFKSVKFH 310
                 **********999**********************8.4688**********44..7888999*********************9*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..eerikvErellgrei 294
                  gE++aV l+ + +r +          + +L+ +++l P+vvv+v+ e   ++ s+ e ++e le ys++++slea +  +   e+++k+E++++ ++i
  TEY35420.1 311 DGEKVAVVLSPATFRRV---------GTGFLSDLRRLAPHVVVHVDGEG-FGAVSYREAVIEGLELYSTVMESLEAAANLNGggEWMRKIEEFVVYPKI 399
                 ***********999998.........368*****************996.5799********************7664333355*********999999 PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 ++ v   g            Wre++  aG+++v +s++a+ qa++l+r+v+++g++v +++g+++l+W+dr Lv++SaW
  TEY35420.1 400 EERVGRIGGL---------GWREAMVGAGLRKVGMSQFAEFQAECLVRRVQVRGFHVSKRQGEMMLCWHDRVLVATSAW 469
                 9988888876.........8*********************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MKLPFPTNNH SPKTIAATIY AASPPYEPKS VLDLRGSPSP AAELEDHVLI TPQLEEWDSL  60
MRELGLQDDP NPSPNSNPNL PDFPPATNAF DSSPFFTTDF GLLSGIPNYT QNPNTADVND  120
WNPGFDYVDE LIQLAECLET NSLQLGHVIA ARLDQRLQSP SGKPLQRAAF YFKEALETLL  180
TGSTRSPDLI QTIKAQKTFS TISPIPMFSG FTATQVVLDA MDGCATAVHV VDFEIGLGGH  240
WASFIREISE ERGKPALRIS ALVTEDFSAE STLVRENLTQ FARELNVVFE IDFVPIRNFE  300
CLYFKSVKFH DGEKVAVVLS PATFRRVGTG FLSDLRRLAP HVVVHVDGEG FGAVSYREAV  360
IEGLELYSTV MESLEAAANL NGGGEWMRKI EEFVVYPKIE ERVGRIGGLG WREAMVGAGL  420
RKVGMSQFAE FQAECLVRRV QVRGFHVSKR QGEMMLCWHD RVLVATSAWM F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-124GRAS family protein