PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY35296.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 173aa MW: 18883.6 Da PI: 7.0137 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135.2 | 2.5e-42 | 13 | 113 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA++r+rdPvyG++g i++lqqq++ l+ael+++++ TEY35296.1 13 PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQVLQAELDAVRN 111 7***********************************************************************************************998 PP DUF260 100 el 101 e+ TEY35296.1 112 EI 113 75 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 173 aa Download sequence |
MLGHTGTLNT TTPCAACKLL RRRCAQECPF SPYFSPHEPH KFASVHKVFG ASNVSKMLME 60 VPESQRADAA NSLVYEANVR LRDPVYGCMG AISSLQQQVQ VLQAELDAVR NEILKYKYKL 120 EESNMLPSSH VSLLSSEGVS VAAPPPSPPP PPPPPPFPPD FSNISNESIT YFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40470.1 | 1e-69 | LBD family protein |