PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35049.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 592aa MW: 65485.4 Da PI: 7.5638

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.3	3.5e-24	124	225	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF +++++el TEY35049.1 124 FAKTLTQSDANNGGGFSVPRYCAETIfprldytAEPPVQ--TILAKDVHGAVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLLAGDSIVFL--RSENGEL 218 89**************************986555555..8999******************************************..458999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY35049.1 219 CVGIRRA 225 *****97 PP
2	Auxin_resp	114.2	1.2e-37	276	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+++++FevvY+Prast+eFvvk++ v++a++v++++G Rfkmafetedss++++ +Gt+++v+ dp++WpnS+Wr L+ TEY35049.1 276 AVSLAASGQPFEVVYYPRASTPEFVVKASAVRAAMRVQWCPGIRFKMAFETEDSSRISWfMGTISSVQVDDPIHWPNSPWRILQ 359 678899****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MIDIMHSLEK PMNQLENNLD PQLWHACAGG MAQIPPLNSN VYYFPQGHVE HAAKNVDFRS 60 FPRISSLVPC RVASIRYLAD AGTDEVYAKI GLVPLREGEC EVDDGVGLLG FDRNGEDKEK 120 PNSFAKTLTQ SDANNGGGFS VPRYCAETIF PRLDYTAEPP VQTILAKDVH GAVWKFRHIY 180 RGTPRRHLLT TGWSNFVNQK KLLAGDSIVF LRSENGELCV GIRRAKLGIG GRPEVSSGWN 240 VGAASGGSSL GRSGLYGFSS EVKEKCNVKA ESVIEAVSLA ASGQPFEVVY YPRASTPEFV 300 VKASAVRAAM RVQWCPGIRF KMAFETEDSS RISWFMGTIS SVQVDDPIHW PNSPWRILQV 360 AWDEPDLLQN VKRVNPWLVE LVSSIPSIHL SPFSFSPTNK RPRQYSEYLS MLLNNPLSPS 420 SPLCCLPDNI STGIQGARHA QFVLSSSDLH LNKLQLGLRP FDFKPLDYGS ELPKFVTGHP 480 PENPNSNASP HYPKTESSVQ HVKKPNEGKN GANAPIFVLF GQPILTEQQI SQSCSVDAMP 540 EGTASPVERQ EHDTYFSCLH DLSYQKLTIA VITDFFQLLA AIARRKQGGL RF

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MIDIMHSLEK PMNQLENNLD PQLWHACAGG MAQIPPLNSN VYYFPQGHVE HAAKNVDFRS  60
FPRISSLVPC RVASIRYLAD AGTDEVYAKI GLVPLREGEC EVDDGVGLLG FDRNGEDKEK  120
PNSFAKTLTQ SDANNGGGFS VPRYCAETIF PRLDYTAEPP VQTILAKDVH GAVWKFRHIY  180
RGTPRRHLLT TGWSNFVNQK KLLAGDSIVF LRSENGELCV GIRRAKLGIG GRPEVSSGWN  240
VGAASGGSSL GRSGLYGFSS EVKEKCNVKA ESVIEAVSLA ASGQPFEVVY YPRASTPEFV  300
VKASAVRAAM RVQWCPGIRF KMAFETEDSS RISWFMGTIS SVQVDDPIHW PNSPWRILQV  360
AWDEPDLLQN VKRVNPWLVE LVSSIPSIHL SPFSFSPTNK RPRQYSEYLS MLLNNPLSPS  420
SPLCCLPDNI STGIQGARHA QFVLSSSDLH LNKLQLGLRP FDFKPLDYGS ELPKFVTGHP  480
PENPNSNASP HYPKTESSVQ HVKKPNEGKN GANAPIFVLF GQPILTEQQI SQSCSVDAMP  540
EGTASPVERQ EHDTYFSCLH DLSYQKLTIA VITDFFQLLA AIARRKQGGL RF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein