PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY34413.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 263aa MW: 29765.1 Da PI: 10.2924

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY34413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.1	4.5e-40	74	201	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..seceaesssssasnsssgkaaksaa.ks 97 + kkdrhski T++g+RdRR+Rls+++a+rfFdLqd LGfdk+skt++WLl+ + pai el++ + sa ++c++e+ + s++ k ++ k+ TEY34413.1 74 PSKKDRHSKINTARGPRDRRMRLSLDIARRFFDLQDLLGFDKASKTVDWLLRSSSPAIRELAKGRAGSAlsESCTSEEAVTSVG-----KGRRGRRgKG 167 579***********************************************************76666546776666666666.....3333333244 PP TCP 98 kksqksaasalnlakesrakarararertrekmrik 133 + q+++ +a+esr kar+rarert++k r+ TEY34413.1 168 RVVQQQKR--ATVARESRRKARERARERTSQKRRLM 201 44444444..7899***************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MLSSNSSSCC NHNPNYTPFS ENDITSQNPN FLFGLIPNSP NIYFDDFQVH YLNFLDHTIL 60 SAPPAAPVPA AATPSKKDRH SKINTARGPR DRRMRLSLDI ARRFFDLQDL LGFDKASKTV 120 DWLLRSSSPA IRELAKGRAG SALSESCTSE EAVTSVGKGR RGRRGKGRVV QQQKRATVAR 180 ESRRKARERA RERTSQKRRL MRESDDVRAY NSDEARGTTQ GEGFSPWNSF PLNETDNAAF 240 FHQIDELQFN GKPWEDYSFN MSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	199	RRKARERARERTSQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-25	TCP family protein