PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY34170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | GATA | ||||||||
Protein Properties | Length: 242aa MW: 26899.5 Da PI: 9.2675 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61 | 1.5e-19 | 134 | 167 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+ttkTplWR+gp g+k+LCnaCG+++rk + TEY34170.1 134 CSDCHTTKTPLWRSGPKGPKSLCNACGIRQRKVR 167 *******************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MNLNLSPMEH VKDKEHDEQQ KAFNFGLNHQ IVSCSSSSST SCRIFFDPSG DHAGFYHPQL 60 YQPRDGYYEY DRGSSSTTSY DIKNKLEIGV KWMAWKNDRV AEAARLEVKQ VMRSSSVETD 120 LRSSYNCDAT IRVCSDCHTT KTPLWRSGPK GPKSLCNACG IRQRKVRRAM AANCGGAPEV 180 NVKEKTGKKR CKVGGGGSST SGKKMDFEDF LSHKLAIHRV FPQDEKVAAI LLMALSSGLV 240 HA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 4e-26 | GATA family protein |