PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY34164.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HRT-like

Protein Properties

Length: 385aa MW: 43320.2 Da PI: 10.4173

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY34164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	50	4.9e-16	259	289	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+++ GsvC+ +Pv gRKRC+ HKG Ri TEY34164.1 259 ICGVATGLGSVCTSSPVAGRKRCAVHKGLRI 289 8*****************************7 PP
2	HRT-like	55.4	1e-17	348	378	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CG+iledGs+Ckr Pv+g+KRC eHKG+Ri TEY34164.1 348 TCGFILEDGSPCKRCPVQGNKRCLEHKGRRI 378 7*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MGVRSRSSTS DTTTRLKRED FRRTKHDSAF SHWKILIGAF DWEDLSMGKE GVERYRTQNL 60 PNWTSCPGVY ELGVAQSGKE TRKLDSASVI PVYLGQADNL RIRLQQYGRD GAHLENGCAT 120 SKTVNCCQSV SAHKGLRLFT DIFSRGLPIV YRCAPMKSKK DAEITEKQLL DRFDYAWNKG 180 SNVSRRQDDI YKKLERLEKG SKFSLLAKKF LFSNQREVGI RITNGSNLSG TGNSTIFSRM 240 LGVRRLQARP VQSDCGDNIC GVATGLGSVC TSSPVAGRKR CAVHKGLRIN GYSLKLDTKV 300 SLPRNAASLK SGVETDQEFN DFQDQTRRYI TENHHRCEKA TSKRFNLTCG FILEDGSPCK 360 RCPVQGNKRC LEHKGRRIRR SKLSS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MGVRSRSSTS DTTTRLKRED FRRTKHDSAF SHWKILIGAF DWEDLSMGKE GVERYRTQNL  60
PNWTSCPGVY ELGVAQSGKE TRKLDSASVI PVYLGQADNL RIRLQQYGRD GAHLENGCAT  120
SKTVNCCQSV SAHKGLRLFT DIFSRGLPIV YRCAPMKSKK DAEITEKQLL DRFDYAWNKG  180
SNVSRRQDDI YKKLERLEKG SKFSLLAKKF LFSNQREVGI RITNGSNLSG TGNSTIFSRM  240
LGVRRLQARP VQSDCGDNIC GVATGLGSVC TSSPVAGRKR CAVHKGLRIN GYSLKLDTKV  300
SLPRNAASLK SGVETDQEFN DFQDQTRRYI TENHHRCEKA TSKRFNLTCG FILEDGSPCK  360
RCPVQGNKRC LEHKGRRIRR SKLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	4e-84	HRT-like family protein