PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY33501.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 580aa MW: 64875.2 Da PI: 7.1669

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY33501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.1	8.6e-15	388	434	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+++P +K++Ka+iL+ ++eY+k+L+ TEY33501.1 388 NHVLAERRRREKLNERFVMLRSMVPFV-----TKMDKASILTDTIEYLKQLK 434 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MVWSDGCYNW AIKTRKTVQA AEESEQLREL YECLAGGEAE QRSSAALSPE DLTESEWFYL 60 MCVSFSFRPG IGLPGKAYVD RQQIWLTRAN KSDSTLFSRT ILAEVHTMFQ SCILLYTVSV 120 GLGWVQEDIG LVQRVKGFFV NCQNPKPPRL APSGHSTSNP TSSSPGYYSL ASQMAEEEEE 180 EVGSDSDQVG GLTPPNQNLA EAMHLDLSDQ DIRVGSPDHS SNNLGSNFHH LAVTQRGTSS 240 EHGGIDKDVT VHRWPCKDPI ITRSFRSSHS GYKLNYLCFY VCVCASALAS ADLITEEDAH 300 YSQTVSSLLE NQSNRWSTLS SSSDTAFSKW LPEPAASTST HCRHDQLLDG GSQWVLKYVL 360 FTLPLLQAKP RDASASACHG PQDELSSNHV LAERRRREKL NERFVMLRSM VPFVTKMDKA 420 SILTDTIEYL KQLKWRIQQL GAESERNVGR QEKSGLRTDG GKRPKVGATV EVSIIESDAL 480 VEISCVDKSG MLLDLMQMLR GLGLHVTTAH SSINNGTFNA ELRAKLTLMF ISTHEKIHRW 540 GSRVGLNRLP HVLITQKLMY DHLSFRWWRV RTAGDRASRR

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MVWSDGCYNW AIKTRKTVQA AEESEQLREL YECLAGGEAE QRSSAALSPE DLTESEWFYL  60
MCVSFSFRPG IGLPGKAYVD RQQIWLTRAN KSDSTLFSRT ILAEVHTMFQ SCILLYTVSV  120
GLGWVQEDIG LVQRVKGFFV NCQNPKPPRL APSGHSTSNP TSSSPGYYSL ASQMAEEEEE  180
EVGSDSDQVG GLTPPNQNLA EAMHLDLSDQ DIRVGSPDHS SNNLGSNFHH LAVTQRGTSS  240
EHGGIDKDVT VHRWPCKDPI ITRSFRSSHS GYKLNYLCFY VCVCASALAS ADLITEEDAH  300
YSQTVSSLLE NQSNRWSTLS SSSDTAFSKW LPEPAASTST HCRHDQLLDG GSQWVLKYVL  360
FTLPLLQAKP RDASASACHG PQDELSSNHV LAERRRREKL NERFVMLRSM VPFVTKMDKA  420
SILTDTIEYL KQLKWRIQQL GAESERNVGR QEKSGLRTDG GKRPKVGATV EVSIIESDAL  480
VEISCVDKSG MLLDLMQMLR GLGLHVTTAH SSINNGTFNA ELRAKLTLMF ISTHEKIHRW  540
GSRVGLNRLP HVLITQKLMY DHLSFRWWRV RTAGDRASRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	393	398	ERRRRE
2	394	399	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-43	bHLH family protein