PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY32093.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 161aa MW: 18260.9 Da PI: 6.7058

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY32093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	130.1	9.4e-41	11	109	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+l+r+C+++C +apyf +++pkkfa vhk+FGasnv+k+l+++pee+reda++slv+eAe+r++dPvyG++g i +lq+++ +l+++l l+++ TEY32093.1 11 SCAACKFLKRRCTPNCQFAPYFRSDEPKKFAKVHKVFGASNVSKILNEVPEEHREDAVNSLVFEAEVRLQDPVYGCIGAIASLQHKMVELQHDLFLARS 109 6*******************************************************************************************9988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MKSQEPRSSS SCAACKFLKR RCTPNCQFAP YFRSDEPKKF AKVHKVFGAS NVSKILNEVP 60 EEHREDAVNS LVFEAEVRLQ DPVYGCIGAI ASLQHKMVEL QHDLFLARSR LACFLDHQPP 120 PPPPPPAPFF DDMSPLFDTP MPDLFDHPTL PLDHFAPFHY P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11090.1	2e-61	LBD family protein