PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY32075.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | FAR1 | ||||||||
Protein Properties | Length: 220aa MW: 25110.6 Da PI: 4.9647 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 27.8 | 8.5e-09 | 108 | 151 | 2 | 47 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 fYn+YA++vGF++rk+ sk+ + +t+ vCs+eg r++ + TEY32075.1 108 FYNKYARQVGFDTRKHGSKRV--GDLVTWLYVVCSREGLRRDLRAY 151 9**************999888..8889***********99987665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MDSSNSFTPT TDFTSTSMDD SSNPSHTTEF SPEARKIHGT TSTENINDNH GSIFDELQSP 60 VSSSIFDSDS KSSEDEELEP VSYIPECPSQ MKPHIGQVFH TLDDATVFYN KYARQVGFDT 120 RKHGSKRVGD LVTWLYVVCS REGLRRDLRA YVDGVDAQMV LNDMKRKKEI CSSFTYDFEV 180 NSKGRLTRLF WCDPIAKHNY HLYGDIVSFD TTYSTNRYDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22170.2 | 4e-09 | FAR1 family protein |