PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31723.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 407aa MW: 44848 Da PI: 8.8226

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31723.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78	9.1e-25	175	219	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e+ TEY31723.1 175 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEA 219 79****************************************996 PP
2	QLQ	61.1	3e-21	111	147	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k TEY31723.1 111 GPFTPSQWMELEHQALIYKYITANVPIPSYLLNPIRK 147 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MDFALLPSDT AFSLQNGDAD KPKYCHGFGF LKQDRAINED NLREFKMSKN SSCGEGSLQR 60 SNGCGLSSAE MLSFSSPNPQ PLTLPYYHYS SNAFARNAGM NGGSMQHGVR GPFTPSQWME 120 LEHQALIYKY ITANVPIPSY LLNPIRKAFE VVGFSSLRSN PLGWNGFHLG YSSTDPEPGR 180 CRRTDGKKWR CSRDAVVDQK YCERHMNRGR HRSRKPVEAQ SAAASNATAK PTVARSIVEN 240 TTLLSKTKPK DSQRQDWERN EFGLVCSDSL VNPLNRSELR QFMDQPDRDA DRTQLSISMA 300 SSPPRSGLSR ELEMGLGLGN RPSSNNNWAP ISWEPSAIGG PLGEVLHNTT TTTTSDAKQL 360 NLIERWDSPR LDASPTGVLQ RGAFASLSNS SAAGSPPHDV STYPSLL

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MDFALLPSDT AFSLQNGDAD KPKYCHGFGF LKQDRAINED NLREFKMSKN SSCGEGSLQR  60
SNGCGLSSAE MLSFSSPNPQ PLTLPYYHYS SNAFARNAGM NGGSMQHGVR GPFTPSQWME  120
LEHQALIYKY ITANVPIPSY LLNPIRKAFE VVGFSSLRSN PLGWNGFHLG YSSTDPEPGR  180
CRRTDGKKWR CSRDAVVDQK YCERHMNRGR HRSRKPVEAQ SAAASNATAK PTVARSIVEN  240
TTLLSKTKPK DSQRQDWERN EFGLVCSDSL VNPLNRSELR QFMDQPDRDA DRTQLSISMA  300
SSPPRSGLSR ELEMGLGLGN RPSSNNNWAP ISWEPSAIGG PLGEVLHNTT TTTTSDAKQL  360
NLIERWDSPR LDASPTGVLQ RGAFASLSNS SAAGSPPHDV STYPSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	6e-49	GRF family protein