PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY31701.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 181aa MW: 20749 Da PI: 9.8639 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.7 | 2.6e-27 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 ri++ + rqvtfskRrng+lKKA+EL +LCdaeva+iifsstgkly++ TEY31701.1 10 RIDDMTSRQVTFSKRRNGLLKKAKELAILCDAEVALIIFSSTGKLYDFG 58 89********************************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MGRGKIVIRR IDDMTSRQVT FSKRRNGLLK KAKELAILCD AEVALIIFSS TGKLYDFGST 60 ASPQCSSNFV VPSRPLTYVP PRPAMAVVAM EQHANPYRSS ACNPPTRTET DTWKVEHFMK 120 SVIERYNKAK EEPHRLVNSI SEVKVIFLAK CQYYIIIRRN LDDFPMPNSF ARVYLSLYEE 180 H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 2e-33 | MIKC_MADS family protein |