PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY31349.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | TCP | ||||||||
Protein Properties | Length: 213aa MW: 23365.1 Da PI: 8.2371 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 97.3 | 2.8e-30 | 28 | 107 | 1 | 81 |
TCP 1 aagkkdrhskihTkvgg.RdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssss 81 a+g+kdrhsk++T gg RdRRvRls ++a+ f+dLqd+LG d++sk+i+WL+ qak ai++l+ + +s+ + +e++s++ TEY31349.1 28 ATGRKDRHSKVSTVTGGtRDRRVRLSPKTAILFYDLQDRLGCDRPSKAIDWLMAQAKSAIDALAAAPPTSS--AVQEEHSNE 107 589**********86544************************************************33333..212222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MDKTGEATFH HINKSHPSPT KRGRLVRATG RKDRHSKVST VTGGTRDRRV RLSPKTAILF 60 YDLQDRLGCD RPSKAIDWLM AQAKSAIDAL AAAPPTSSAV QEEHSNEDQL FLELFGADCG 120 GYAEREPLQS SYYTQFQGFG FSDQELTNFH AADEMAALSM SSSRACSLDR NVCRSGPTHG 180 LGRHCSTAIG VSRERLRSSP FFDVVASALT LEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53230.1 | 4e-22 | TCP family protein |