PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31335.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 730aa MW: 80855.1 Da PI: 7.8631

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.2	1.7e-24	168	269	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++el+ TEY31335.1 168 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR--GGDGELR 263 99**************************963.3445679*********************************************3..378999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ TEY31335.1 264 LGIRRA 269 **9986 PP
2	Auxin_resp	108.6	6.7e-36	294	375	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+s+F+++YnPr+ +s+ +v+ +k+ k+l++++s GmRfk++fetedss rr+sG++vgvsd+dp rWp+SkW++L TEY31335.1 294 VVNAISTRSTFDICYNPRVRSSDIIVPHHKFCKSLTQSFSCGMRFKIRFETEDSSDRRCSGLIVGVSDVDPARWPGSKWKCL 375 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 730 aa Download sequence
MVMCGMIDLN TVDNEDEIAS ACGSPSSSAA SGNLELATAP PPSVSMELWH ACAGPLISLP 60 KRGSAVVYFP QGHVEFLPEH PAVAYDLPPH VFCRVVDVKL HADAASDEVY SQVSLVPDQQ 120 ILLFSKESFY QVNSFWQIEQ KWGEGIMESE VEDEDVEGVR KTMTPHMFCK TLTASDTSTH 180 GGFSVPRRAA EDCFPPLDYK QQRPSQELVA KDLHGIEWKF RHIYRGQPRR HLLTTGWSAF 240 VNKKKLVSGD AVLFLRGGDG ELRLGIRRAV QIKSGATVLP PTSQQFNASS IAAVVNAIST 300 RSTFDICYNP RVRSSDIIVP HHKFCKSLTQ SFSCGMRFKI RFETEDSSDR RCSGLIVGVS 360 DVDPARWPGS KWKCLLVRWD DMEVNRLNRV SPWEIDVAGP MSGPNSFALS GTKRNRIGFP 420 PAKPDAPIHR DGSDVSDFGE PLRFQKVLQG QEVFPFGSPY AGAEASRNHL SDIRGYPSLS 480 TFNAGGNSIR QHHADARNSS TVGESFQFRK VLQGQETMPI LSYWRGPQEK NASNVYNGIQ 540 VPRNGNCWST TPQYNASPRL SPSMVRGLSP SSVLLLQQSS PQSSQIASLL HGYQNKHETS 600 YQDSFRVPQR ITNKFAPYEI GPKDSLQHGY RSNGATEAHN SPTVSTHRPL LTQPLFRDSQ 660 NFVSMCKDSC RLFGFSLTEG INADNQAAAS ASAYEEQLHQ PPLVAKVMAS SYTKPRDLYA 720 VRDRLLDIAL

Sequence ? help Back to Top

Protein Sequence Length: 730 aa Download sequence

MVMCGMIDLN TVDNEDEIAS ACGSPSSSAA SGNLELATAP PPSVSMELWH ACAGPLISLP  60
KRGSAVVYFP QGHVEFLPEH PAVAYDLPPH VFCRVVDVKL HADAASDEVY SQVSLVPDQQ  120
ILLFSKESFY QVNSFWQIEQ KWGEGIMESE VEDEDVEGVR KTMTPHMFCK TLTASDTSTH  180
GGFSVPRRAA EDCFPPLDYK QQRPSQELVA KDLHGIEWKF RHIYRGQPRR HLLTTGWSAF  240
VNKKKLVSGD AVLFLRGGDG ELRLGIRRAV QIKSGATVLP PTSQQFNASS IAAVVNAIST  300
RSTFDICYNP RVRSSDIIVP HHKFCKSLTQ SFSCGMRFKI RFETEDSSDR RCSGLIVGVS  360
DVDPARWPGS KWKCLLVRWD DMEVNRLNRV SPWEIDVAGP MSGPNSFALS GTKRNRIGFP  420
PAKPDAPIHR DGSDVSDFGE PLRFQKVLQG QEVFPFGSPY AGAEASRNHL SDIRGYPSLS  480
TFNAGGNSIR QHHADARNSS TVGESFQFRK VLQGQETMPI LSYWRGPQEK NASNVYNGIQ  540
VPRNGNCWST TPQYNASPRL SPSMVRGLSP SSVLLLQQSS PQSSQIASLL HGYQNKHETS  600
YQDSFRVPQR ITNKFAPYEI GPKDSLQHGY RSNGATEAHN SPTVSTHRPL LTQPLFRDSQ  660
NFVSMCKDSC RLFGFSLTEG INADNQAAAS ASAYEEQLHQ PPLVAKVMAS SYTKPRDLYA  720
VRDRLLDIAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-178	ARF family protein