PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY30685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 472aa MW: 50151.3 Da PI: 8.0492 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 37.9 | 2.9e-12 | 32 | 57 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 +++ C +++rtG+C yG+rC+F+H++ TEY30685.1 32 DEPDCIYYLRTGFCGYGNRCRFNHPR 57 6899********************96 PP | |||||||
2 | zf-CCCH | 39.3 | 1.1e-12 | 79 | 103 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +++C++f+rtG Ck+G++Ck++H++ TEY30685.1 79 EPICQYFMRTGMCKFGASCKYNHPK 103 799********************96 PP | |||||||
3 | zf-CCCH | 34.7 | 2.9e-11 | 124 | 149 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C+++ +tG+Ck+G +CkF+H++ TEY30685.1 124 GEKECSYYIKTGQCKFGVTCKFHHPQ 149 6789********************97 PP | |||||||
4 | zf-CCCH | 37.5 | 3.9e-12 | 294 | 320 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C++++rtG Ck+G++Ck++H+p TEY30685.1 294 PGQPDCQYYLRTGDCKFGATCKYHHPP 320 5789*********************97 PP | |||||||
5 | zf-CCCH | 36.7 | 6.8e-12 | 342 | 366 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +lC+++a++G Ck+G++CkF H++ TEY30685.1 342 APLCSHYAQNGVCKFGPSCKFDHPM 366 68*********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MPIDSRFDFV NAEPMWGLGL GEGPESYPER PDEPDCIYYL RTGFCGYGNR CRFNHPRDRS 60 AAMGALRAIG GEYPERHGEP ICQYFMRTGM CKFGASCKYN HPKHGAGSSP PTTLNFYGYP 120 LRQGEKECSY YIKTGQCKFG VTCKFHHPQP AGIPMPAPGA GPGPLAGPAA MPTPTLYPTV 180 QSPSVQSSQQ YGVLHGNWPV SRPTMLPGSY VPGSYGPMLL APGVVPVPGW NPYSAQVSPG 240 ALQSSQPTVG AGPVYGITQL PPSSTTYTGA HLSGTSLLRP SSSSQKEYAF PDRPGQPDCQ 300 YYLRTGDCKF GATCKYHHPP EWSAQQSVVV LSPMGLPMRP GAPLCSHYAQ NGVCKFGPSC 360 KFDHPMRALS YSTSASSLTD MPVAPYPVGS TNATLAPSSS SLDLRPELLS GFSKDAFPAN 420 LSSTNSSSAS IGSTFSRSGL IPEFGIQHSG QSTASSTGGS SSHQEGEVNI SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47850.1 | 1e-131 | C3H family protein |