PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY30276.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 681aa MW: 75546.1 Da PI: 6.9693

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY30276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.6	1.1e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ ++d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++ l TEY30276.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldytADPPVQ--TILVKDVHGEVWNFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAENGDL 215 89**************************997556555..8********************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY30276.1 216 CVGIRRA 222 **997 PP
2	Auxin_resp	104.5	1.3e-34	288	371	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ +++++Fev+Y+Pras++eF+v ++ v++al+++++ GmRfkmafetedss++++ +Gt+++ +dp rWp+S+Wr+L+ TEY30276.1 288 AATLGANGKPFEVIYYPRASNPEFCVMTSLVKAALQIHWCSGMRFKMAFETEDSSRISWfMGTISSAVVADPARWPDSPWRLLQ 371 56778999**************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MLTFMESKER SKESEKCLDS QLWHACAGSM VQMPPVNSNV FYFPQGHFEH VSGSLDLRNC 60 PRLPAYVSCR VSAVKFMADP DTDEVFAKIR LVPVEGNEVD LDKDGAAEVN GLESQDKPSS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYTADPPVQT ILVKDVHGEV WNFRHIYRGT 180 PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKNGIGGGS EVPSQWSPGG 240 GGCALPYGGF SMFFKEDESK LSRNGGGNNN GSLVSKGRRV KTEDVIEAAT LGANGKPFEV 300 IYYPRASNPE FCVMTSLVKA ALQIHWCSGM RFKMAFETED SSRISWFMGT ISSAVVADPA 360 RWPDSPWRLL QVRWDEPDLL QNVKRVNPWS IELVSNLPNI HLSPFSSPHK KLRLPHPPDF 420 SIDGHLPFPA FTGSHPLGSS YPFGCLTDNA PAGMQGARHG QYDITLSDLH FSKLRSGQFP 480 PDSHRPLDRA SIPIRPSNPF VSQPSNDENI SCLLTMGTIS IQGSTKSQNR KEAPFVLFGQ 540 EIHTAKQISV TCSSDTVSTR RTVNSLDESG FFPNRNDARE RSSSKWFQSE LNIETDHCKV 600 FMESEDVGRT LNLSLLGSYE ELHMKLASMF RVEITEIAKH IHYLDDTGAV RQLGEEPFSK 660 FSKTARRLRV VADSSSDSVE V

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MLTFMESKER SKESEKCLDS QLWHACAGSM VQMPPVNSNV FYFPQGHFEH VSGSLDLRNC  60
PRLPAYVSCR VSAVKFMADP DTDEVFAKIR LVPVEGNEVD LDKDGAAEVN GLESQDKPSS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYTADPPVQT ILVKDVHGEV WNFRHIYRGT  180
PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKNGIGGGS EVPSQWSPGG  240
GGCALPYGGF SMFFKEDESK LSRNGGGNNN GSLVSKGRRV KTEDVIEAAT LGANGKPFEV  300
IYYPRASNPE FCVMTSLVKA ALQIHWCSGM RFKMAFETED SSRISWFMGT ISSAVVADPA  360
RWPDSPWRLL QVRWDEPDLL QNVKRVNPWS IELVSNLPNI HLSPFSSPHK KLRLPHPPDF  420
SIDGHLPFPA FTGSHPLGSS YPFGCLTDNA PAGMQGARHG QYDITLSDLH FSKLRSGQFP  480
PDSHRPLDRA SIPIRPSNPF VSQPSNDENI SCLLTMGTIS IQGSTKSQNR KEAPFVLFGQ  540
EIHTAKQISV TCSSDTVSTR RTVNSLDESG FFPNRNDARE RSSSKWFQSE LNIETDHCKV  600
FMESEDVGRT LNLSLLGSYE ELHMKLASMF RVEITEIAKH IHYLDDTGAV RQLGEEPFSK  660
FSKTARRLRV VADSSSDSVE V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein