PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY29468.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 524aa    MW: 58306.9 Da    PI: 5.412
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY29468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS425.44.5e-1301555242374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ LlecA +v+sgd+++a+++++ l++++s +gdp +R+aay++eAL ar+a s+++ly+al++++++   ss++l+a+++++ev+P+++f++++aN 
  TEY29468.1 155 KHMLLECAAVVHSGDFKRASSMINVLRQHVSIQGDPSERIAAYLVEALVARMAMSGKGLYRALKCKDAP---SSDRLSAMQVLFEVCPCFRFGFMAANG 250
                 589*****************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  Ilea+ ge+rvHi+Dfd++qG Q+ +Llq+La+ p++ p++R+Tgv++pes+      l  +g+rL+ +A++l+++fef++ v  +++ ++++ L ++
  TEY29468.1 251 SILEAFRGEKRVHIVDFDVNQGSQYYTLLQTLAKTPGDRPHVRLTGVDDPESVqrPVGGLAIIGQRLELLAKQLKLSFEFKA-VPAETALVSPSVLGCR 348
                 ***************************************************99888899***********************.7999************ PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 pgEal+Vn+++ lh+l+desvs+ + rd++L+++k+l+Pk+++vveq++++n+++F +rf+ea +yy+a+f+sl+a+l+r+s++r++vE+++l+r+i n
  TEY29468.1 349 PGEALVVNFAFLLHHLPDESVSTVNLRDQLLRMIKGLKPKLMTVVEQDVNTNTSPFPQRFAEAYNYYAAVFESLDATLARDSQDRMNVEKHCLARDIIN 447
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vvaceg+er+er e ++kWr+r+++aGF++  +s ++  +++ l+++++++ y+v+ee+g+l +gW++++L++ SaWr
  TEY29468.1 448 VVACEGEERIERYEVAGKWRSRMTMAGFTTCGISRDVRGEIDKLIQQYSDR-YKVKEEKGALHFGWEEKTLIVSSAWR 524
                 *************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MSLVGSAALF RRPELYSLKD DNESSGLSTS SLYSYSSDSY DPKYFLDSPS SSDVIGNPFQ  60
SPSSQRTSLV ESTHNSYQFD YASELDSPRE VEYDEDKLML KLQELEKALL DDNGAAMEID  120
GDFFDSPKGS SSSDSNLSST TSSKDMVISG PLSRKHMLLE CAAVVHSGDF KRASSMINVL  180
RQHVSIQGDP SERIAAYLVE ALVARMAMSG KGLYRALKCK DAPSSDRLSA MQVLFEVCPC  240
FRFGFMAANG SILEAFRGEK RVHIVDFDVN QGSQYYTLLQ TLAKTPGDRP HVRLTGVDDP  300
ESVQRPVGGL AIIGQRLELL AKQLKLSFEF KAVPAETALV SPSVLGCRPG EALVVNFAFL  360
LHHLPDESVS TVNLRDQLLR MIKGLKPKLM TVVEQDVNTN TSPFPQRFAE AYNYYAAVFE  420
SLDATLARDS QDRMNVEKHC LARDIINVVA CEGEERIERY EVAGKWRSRM TMAGFTTCGI  480
SRDVRGEIDK LIQQYSDRYK VKEEKGALHF GWEEKTLIVS SAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein