PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY29257.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 786aa MW: 87722.1 Da PI: 6.2376

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY29257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.5	6.2e-24	176	277	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + + +el+ TEY29257.1 176 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyKEQ-RPSQELIAKDLHGMEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEAGELR 271 99**************************86333.45679********************************************..449999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ TEY29257.1 272 FGIRRA 277 ***996 PP
2	Auxin_resp	109.1	4.8e-36	302	383	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+s+++ F+v+Y+Pr+s+++F+v+vek++ +++k+ vG+Rf+m+f+ +ds+err+sG+v+gv d+dp+rW+nSkWr+L TEY29257.1 302 VANAISSNTSFHVFYSPRSSHADFIVPVEKYVMCTTSKLLVGTRFRMKFDFDDSPERRFSGVVTGVGDMDPYRWQNSKWRCL 383 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 786 aa Download sequence
MEFDLNHAVS EVEQNIACVN GEECEGGSGD YGCLQTSISE SAPPSIYVEL WHACAGPLTS 60 LPKKGNVVVY FPQGHMEQAA FASPFPTLDM PTFDLPPQIF CRVIDVRLLV SALSSFWFVS 120 NALLANKEND EVYTQLNLLP LPEMGGVKLD GKENENADFD EDGNGVMPAK STSHMFCKTL 180 TASDTSTHGG FSVPRRAAED CFPPLDYKEQ RPSQELIAKD LHGMEWKFRH IYRGQPRRHL 240 LTTGWSIFVS QKNLVSGDAV LFLRGEAGEL RFGIRRAARP RNGLPDSIIK NQGSYPNVLS 300 PVANAISSNT SFHVFYSPRS SHADFIVPVE KYVMCTTSKL LVGTRFRMKF DFDDSPERRF 360 SGVVTGVGDM DPYRWQNSKW RCLMVRWDED IMRNHQERVS PWDIDFSGNY APLSIQPSPR 420 TKKLRSNLHV TPHGSPIAGG GSVLDFEESV RSSKVLQGQE NVGLLSPFYR GDQENRQLDF 480 GMQPTTPNPV ANRMDKINYG EFVRNHAPAN FTGFLESNWF PKVLQGQEIC PFKSLAGISS 540 SDIGVWPKPQ HGYNLHNQMS TPSFYPLASE GSRSIPIHHK NIHTGGLILS NFSNFQTETS 600 ILSGTKADVS RMPHLTNEPR ALERTSALKH MNNESNLKEE VQSCKLFGFS LTEDPAAINL 660 QGPNKRSCTK VHKPGSLVGR AIDLSRLNSY EDLLTELERL FNMEGLLRDP NCGWRILYTD 720 SENDMMVIGD DPWQEFVEVV TKIHIHTQEE VEKLTVGMTK SCLEEAPSAP DVSKSSSVGS 780 PILPLL

Sequence ? help Back to Top

Protein Sequence Length: 786 aa Download sequence

MEFDLNHAVS EVEQNIACVN GEECEGGSGD YGCLQTSISE SAPPSIYVEL WHACAGPLTS  60
LPKKGNVVVY FPQGHMEQAA FASPFPTLDM PTFDLPPQIF CRVIDVRLLV SALSSFWFVS  120
NALLANKEND EVYTQLNLLP LPEMGGVKLD GKENENADFD EDGNGVMPAK STSHMFCKTL  180
TASDTSTHGG FSVPRRAAED CFPPLDYKEQ RPSQELIAKD LHGMEWKFRH IYRGQPRRHL  240
LTTGWSIFVS QKNLVSGDAV LFLRGEAGEL RFGIRRAARP RNGLPDSIIK NQGSYPNVLS  300
PVANAISSNT SFHVFYSPRS SHADFIVPVE KYVMCTTSKL LVGTRFRMKF DFDDSPERRF  360
SGVVTGVGDM DPYRWQNSKW RCLMVRWDED IMRNHQERVS PWDIDFSGNY APLSIQPSPR  420
TKKLRSNLHV TPHGSPIAGG GSVLDFEESV RSSKVLQGQE NVGLLSPFYR GDQENRQLDF  480
GMQPTTPNPV ANRMDKINYG EFVRNHAPAN FTGFLESNWF PKVLQGQEIC PFKSLAGISS  540
SDIGVWPKPQ HGYNLHNQMS TPSFYPLASE GSRSIPIHHK NIHTGGLILS NFSNFQTETS  600
ILSGTKADVS RMPHLTNEPR ALERTSALKH MNNESNLKEE VQSCKLFGFS LTEDPAAINL  660
QGPNKRSCTK VHKPGSLVGR AIDLSRLNSY EDLLTELERL FNMEGLLRDP NCGWRILYTD  720
SENDMMVIGD DPWQEFVEVV TKIHIHTQEE VEKLTVGMTK SCLEEAPSAP DVSKSSSVGS  780
PILPLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein