PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY29193.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 635aa    MW: 70228.3 Da    PI: 7.1985
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY29193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS421.57e-1292546201373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++l+++cAe + s++ ++++++Larl elasp+g+p++Rl+ayfteALa r+ar +++++++ pp+e +  ++++   al+++++vsPi kf h+t+N
  TEY29193.1 254 LINLVVACAEQIGSKNIAAVSHCLARLGELASPRGSPLHRLIAYFTEALALRVARLWPQVFHITPPRELE--HVDD--DALRVLNQVSPITKFVHFTCN 348
                 57899***************************************************************98..2333..5889***************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 + +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+    sk+el etg+rLa fAe++++pf+f++ v++rled++l++L+vk+
  TEY29193.1 349 EILLRALEGKDRVHIIDFDIKQGLQWPSLFQSLASRASPPSHVRITGIGE----SKQELMETGDRLAGFAEAFNLPFQFHP-VVDRLEDVRLWMLHVKE 442
                 **************************************************....***************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E+++ n+v+qlh++l e  +l++    +L l++s +++vvv++eqea hn++++ +r++++l+yysa+fds++++lp es +r+k+E++ +grei+n+
  TEY29193.1 443 KETVVANCVFQLHKMLYEGSALRE----FLGLIRSSNAQVVVMAEQEAAHNEATLDARLFNSLKYYSAVFDSIDSSLPLESPARMKMEEM-FGREIRNI 536
                 ****************98888888....**************************************************************.******** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.......eesgslvlgWkdrpLvsvSaW 373
                 + ceg++r+erhe++ kW++ +e+ GF  v +se++  q +++l++++ ++ yr e       ++s sl+l W+d+pL++vSaW
  TEY29193.1 537 IGCEGRHRFERHERFDKWQQLMEQGGFCCVGVSERELFQGQMMLKMYSsNHNYRAEvqqgsssSSSSSLTLSWSDQPLYAVSAW 620
                 ************************************************8888999966665544599999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 635 aa     Download sequence    
MLAGCSSTLL SPRHRLRSEA SAQFQACHIA DMSTQRLDLP CSFGRKEALR PQPVRQVGIS  60
IDKGIESKSS LRQNIKLPPV ATERGEEIWG RSKKRYAATD EGSNYMGTVK KRKRGNGKSV  120
EESGQFMSSE DFWFHAGTPQ VPFSLSCSGE EREERGCFDP PPLPPLSCIP WFDSVVTKVT  180
DSGKSKDVHP HKEVSASGSS STSSSSHSLA LGLGSGNPTV EREAAGNGSS SRNPSEAVAG  240
HNGSSQREHE CVELINLVVA CAEQIGSKNI AAVSHCLARL GELASPRGSP LHRLIAYFTE  300
ALALRVARLW PQVFHITPPR ELEHVDDDAL RVLNQVSPIT KFVHFTCNEI LLRALEGKDR  360
VHIIDFDIKQ GLQWPSLFQS LASRASPPSH VRITGIGESK QELMETGDRL AGFAEAFNLP  420
FQFHPVVDRL EDVRLWMLHV KEKETVVANC VFQLHKMLYE GSALREFLGL IRSSNAQVVV  480
MAEQEAAHNE ATLDARLFNS LKYYSAVFDS IDSSLPLESP ARMKMEEMFG REIRNIIGCE  540
GRHRFERHER FDKWQQLMEQ GGFCCVGVSE RELFQGQMML KMYSSNHNYR AEVQQGSSSS  600
SSSSLTLSWS DQPLYAVSAW APVNGGGGSS SSLPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193113KKRYAATDEGSNYMGTVKKRK
293114KKRYAATDEGSNYMGTVKKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein