PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY29001.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 403aa MW: 44460.7 Da PI: 6.7942

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY29001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.4	0.00029	253	285	17	54
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ L++l+ + +K + a++L +A++YIk L TEY29001.1 253 GDRVTALQQLVSPF-----GKTDTASVLHEAIDYIKLL 285 55666677777776.....8****************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MEEEFQSVVC GGNWWNPSRN LFASSPCSAT VNDSGCLNPS LVKTAKSISN DSTGSGSSVV 60 LQEAPKPQNM PMDSTFHMIA DDWNQDLIHD SAISQQNYSY MNNLEPTNSV ANTATSFPLN 120 TTSYSYTSSL LHTLFDTEPL LENPANNFPS PPNLRPSFPK QQQIANNFQL INNASFWNAT 180 AGASFLPSSM PQLIPSALAK PKLHHQNFGS KNVNRKAAGA DAAAMKDGNE PSLKRARIET 240 PSPTFKVRKE KLGDRVTALQ QLVSPFGKTD TASVLHEAID YIKLLHDQVN VLSTPYLKNG 300 PPPLQRQQAY DKIKDQEDTI KDLKSRGLCL VPISSTFPVA TETTPDFWTP TFGGSFSIDE 360 KQDKGKEGEK RKGEKTAMYH HEGVVDEKRE QVLNFALGYN AYR

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MEEEFQSVVC GGNWWNPSRN LFASSPCSAT VNDSGCLNPS LVKTAKSISN DSTGSGSSVV  60
LQEAPKPQNM PMDSTFHMIA DDWNQDLIHD SAISQQNYSY MNNLEPTNSV ANTATSFPLN  120
TTSYSYTSSL LHTLFDTEPL LENPANNFPS PPNLRPSFPK QQQIANNFQL INNASFWNAT  180
AGASFLPSSM PQLIPSALAK PKLHHQNFGS KNVNRKAAGA DAAAMKDGNE PSLKRARIET  240
PSPTFKVRKE KLGDRVTALQ QLVSPFGKTD TASVLHEAID YIKLLHDQVN VLSTPYLKNG  300
PPPLQRQQAY DKIKDQEDTI KDLKSRGLCL VPISSTFPVA TETTPDFWTP TFGGSFSIDE  360
KQDKGKEGEK RKGEKTAMYH HEGVVDEKRE QVLNFALGYN AYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	1e-49	bHLH family protein