PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28832.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 477aa MW: 52861.1 Da PI: 8.4503

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	2e-05	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY28832.1 77 FVCEICSKGFQRDQNLQLHRRGH 99 89*******************88 PP
2	zf-C2H2	12.8	0.00035	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ TEY28832.1 154 WKCEKCSKKYAVQSDWKAHSKTC 176 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MIKISAIQEE NISNLTTAST DASASSTGGE MYPPPYFPAQ TTPPPPPKKK RSQPGHPDPD 60 SEVISLSPRT LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLKQRSS KDVMRKKVYV 120 CPEASCVHHD PSRALGDLTG IKKHFFRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE 180 YRCDCGTLFS RRDSFITHRA FCDALAEESA KSITTTIIPS LQNAPNSLSH HINLQQIQSQ 240 LPFPIKKEHQ AFTLRPPWLP PQFQDFQENP QTHHNPNPNP NPNTSMGPTP FHHHHLPTPH 300 ISATALLQKA TEMGSKSSGA HHAAGETPTT AGFGLKLASR DHHQFINGMA PFSNNKAASP 360 PNSHSMLHDM MMISASGFDH QESAFEDEDL SFAGILNNNA SSSSSSKRVD ESLDFDATLN 420 QFGASNGGNH DDGMTRDFLG LRPLSQSDIL SFAGLSNCIT TTSCVEHQTQ TQRSWQG

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MIKISAIQEE NISNLTTAST DASASSTGGE MYPPPYFPAQ TTPPPPPKKK RSQPGHPDPD  60
SEVISLSPRT LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLKQRSS KDVMRKKVYV  120
CPEASCVHHD PSRALGDLTG IKKHFFRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE  180
YRCDCGTLFS RRDSFITHRA FCDALAEESA KSITTTIIPS LQNAPNSLSH HINLQQIQSQ  240
LPFPIKKEHQ AFTLRPPWLP PQFQDFQENP QTHHNPNPNP NPNTSMGPTP FHHHHLPTPH  300
ISATALLQKA TEMGSKSSGA HHAAGETPTT AGFGLKLASR DHHQFINGMA PFSNNKAASP  360
PNSHSMLHDM MMISASGFDH QESAFEDEDL SFAGILNNNA SSSSSSKRVD ESLDFDATLN  420
QFGASNGGNH DDGMTRDFLG LRPLSQSDIL SFAGLSNCIT TTSCVEHQTQ TQRSWQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	117	KLKQRSSKDVMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13810.1	1e-113	C2H2 family protein